Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01376 ATGGGTAAGTTCTGTTTTTGTGGGTTAGTTTTTCTGGGGTTGTTTGTGTGGATTTGTGGTGTTGATGGGTTCCCAATTGAGGATCTGGTTGTGAGGTTGCCTGGTCAACCCAAGGTGGACTTCAGGCAGTTTGCTGGGTATGTTGATGTTGATGTTAAGGCTGGGAGGAGTTTATTTTATTACTTTGTTGAAGCGGAGGGAGATGCACACAAGAAGCCCCTTACTCTCTGGTTAAATGGAGGCCCAGGTTGTTCCTCCATTGGTGGAGGTGCATTTACAGAATTGGGCCCATTCTTTCCAAGAGGAGATGGTCGGAGCCTTAGGAGAAATCCAAAATCATGGAACAAAGCATCAAATCTACTCTTCATTGAATCTCCTGCTGGGGTCGGATGGTCTTATTCAAATACAACTTCAGATTATACTTGTGGGGATGACTCCACTGCTAAGGACATGCATGAATTCCTAATTAGCTGGTACGGCAAGTTTCCAGCGTTCAAGTCCAGAGACTTGTTTCTTACTGGAGAAAGTTATGCAGGGCATTACATACCACAGTTGGCAAATGTTCTACTGGAGCACAATAAATATTCAACTGATTTCAAGTTCAAGATCAAAGGAGTAGCTATTGGAAATCCACTTCTTAAGCTCGATAGGGATATCCCCGCATCCTACGAATTCTTTTGGTCGCACGGGATGATTTCTGATGAAATTGGCCTCACGATCATGAATGAATGTGATTTCGATGATTATGTCTTTAGCAGTCCACACAATGTGACCCATTCATGCAACCAAGCTATTGCAGATGCAAATCAGGTGGTTGGCGATTATGTAAACCAATATGATGTGATCCTCGATGTCTGTTACCCGTCTATTGTAGAACAAGAGCTGCGATTGAAGAAAATGGCTACTAAGATCAGCATTGGGGTTGATGTGTGCATGACCTATGAGAGACGTTTCTATTTTAACCTGCCGGAAGTTCAACGGGCTCTTCATGCAAACCGGACCAATTTACCTTACAGATGGTCAATGTGCAGTGATGTAGTGGATTATAACAACACCGATGGCAGCATCAACATCCTTCCCATACTGAAAAACATAGTCCAACATCGTATTCCTGTCTGGGTTTTCAGTGGAGATCAAGATTCTGTTGTACCATTGATGGGTTCACGTACACTCATCCGTGAACTAGCTCACGATCTGAAATTTAAGATCACAGTCCCCTATGGAGCTTGGTTTCACAAAGGACAGGTGGGAGGTTGGGTAACTGAGTATGGAAATTTATTGACCTTTGCCACTGTAAGAGGTGCTGCTCATATGGTACCCTATGCACAGCCTGCAAGAGCTTTGCATCTGTTCAAGTCATTTGTGTCTAGCAGGAGATTGCCAAATTCGACTTATCCTTCCATAGATGATTGA 1413 0.4352 MGKFCFCGLVFLGLFVWICGVDGFPIEDLVVRLPGQPKVDFRQFAGYVDVDVKAGRSLFYYFVEAEGDAHKKPLTLWLNGGPGCSSIGGGAFTELGPFFPRGDGRSLRRNPKSWNKASNLLFIESPAGVGWSYSNTTSDYTCGDDSTAKDMHEFLISWYGKFPAFKSRDLFLTGESYAGHYIPQLANVLLEHNKYSTDFKFKIKGVAIGNPLLKLDRDIPASYEFFWSHGMISDEIGLTIMNECDFDDYVFSSPHNVTHSCNQAIADANQVVGDYVNQYDVILDVCYPSIVEQELRLKKMATKISIGVDVCMTYERRFYFNLPEVQRALHANRTNLPYRWSMCSDVVDYNNTDGSINILPILKNIVQHRIPVWVFSGDQDSVVPLMGSRTLIRELAHDLKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPARALHLFKSFVSSRRLPNSTYPSIDD* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01376 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 444 IPR001563 GO:0004185|GO:0006508
Eupl13g01376 470 SUPERFAMILY alpha/beta-Hydrolases 22 464 IPR029058 -
Eupl13g01376 470 Gene3D alpha/beta hydrolase 26 287 IPR029058 -
Eupl13g01376 470 Pfam Serine carboxypeptidase 35 456 IPR001563 GO:0004185|GO:0006508
Eupl13g01376 470 Gene3D - 358 456 - -
Eupl13g01376 470 FunFam Carboxypeptidase 358 457 - -
Eupl13g01376 470 Gene3D - 311 348 - -
Eupl13g01376 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Eupl13g01376 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Eupl13g01376 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Eupl13g01376 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Eupl13g01376 470 FunFam Carboxypeptidase 25 288 - -
Eupl13g01376 470 ProSitePatterns Serine carboxypeptidases, serine active site. 172 179 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01376 Eupl-Chr13 28750313 28755140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01376 317 460 Calmodulin-binding Proteins AT2G22960 25.694 1.36e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01376 K16297 - nnu:104589265 834.328