Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01370 ATGTCGAGCAGCACAGCTGGTCAAGTCATTCGATGCAGAGCTGCGGTAGCATGGGAAGCAGGGAAGCCACTGGTTATAGAAGAAGTGGAGGTGGCACCTCCACAGAAGATGGAGGTTCGTTTGAAGATTCTCTACACCTCCCTCTGCCACACTGATGTTTACTTCTGGGAAGCCAAGGGACAGAAACCAATGTTTCCTCGCATCTTCGGCCACGAAGCAGGAGGAATCGTCGAGAGCATCGGCGAGGGGGTGACTGATCTTAAACCGGGAGATCACGTCCTACCAGTGTTCACTGGGGAGTGTAAGGAGTGCCGCCACTGTAAATCAGAGGAGAGCAACATGTGTGACCTCCTCAGGATTAACACTGACAGGGGAGTGATGCTTAGTGACGGAAAGTCGAGGTTCTCCATCAATGGAAAACCCATATACCATTTTGTTGGCACTTCCACCTTCAGTGAGTACACTGTTGTCCATGTCGGTTGTGTTGCCAAGATCAACCCTGCTGCTCCACTCGACAAAGTTTGTATTCTCAGCTGTGGAATCTCTACAGGTCTTGGTGCTGCTTTGAATGTTGCAAAACCCAAAAAGGGTTCAACAGTAGCCATTTTTGGATTGGGAGCTGTGGGCCTTGCTGCTGCTGAAGGAGCTAGAATTGCTGGGGCTTCGAGGATTATTGGTGTCGATTTGAACTCTAATAGATTCAATGAAGCCAAGAAGTTTGGCGTTACCGAGTTTGTGAACCCGAAAGACCATAACAAACCAGTTCAAGAGGTGATTGCTGAGATGACAGTTGGAGGAGTGGACCGAAGCATCGAGTGTACTGGGAGCATCAACGCAATGATCTCTGCTTTCGAATGTGTTCACGATGGTTGGGGTGTTGCTGTACTTGTCGGTGTGCCAAACAAAGATGACGCGTTCAAGACCCACCCCATGAATGTGTTGAATGAGAGGACTCTCAAGGGTACCTTCTTTGGCAACTACAAACCTCGCTCTGATCTTCCCTCCATTGTAGAGAAGTACATGAATAAGGAGCTTGAACTGGAGAAGTTCTTGACCCATGAAGTCTCTTTCACTGAGATCAACAAGGCGTTTGAGTACATGCTACAAGGTGACAGCCTCCGATGCATCATCCGCATGGATGCATAG 1146 0.4887 MSSSTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQKPMFPRIFGHEAGGIVESIGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRINTDRGVMLSDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCILSCGISTGLGAALNVAKPKKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFNEAKKFGVTEFVNPKDHNKPVQEVIAEMTVGGVDRSIECTGSINAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNVLNERTLKGTFFGNYKPRSDLPSIVEKYMNKELELEKFLTHEVSFTEINKAFEYMLQGDSLRCIIRMDA* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01370 381 Pfam Zinc-binding dehydrogenase 207 330 IPR013149 -
Eupl13g01370 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Eupl13g01370 381 Gene3D - 20 371 - -
Eupl13g01370 381 Pfam Alcohol dehydrogenase GroES-like domain 38 162 IPR013154 -
Eupl13g01370 381 FunFam alcohol dehydrogenase 1-like isoform X1 20 183 - -
Eupl13g01370 381 Gene3D - 184 322 - -
Eupl13g01370 381 CDD alcohol_DH_plants 10 378 - -
Eupl13g01370 381 SUPERFAMILY GroES-like 329 378 IPR011032 -
Eupl13g01370 381 FunFam Alcohol dehydrogenase class-P 184 322 - -
Eupl13g01370 381 SUPERFAMILY GroES-like 5 187 IPR011032 -
Eupl13g01370 381 PANTHER ALCOHOL DEHYDROGENASE 7 377 - -
Eupl13g01370 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 343 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01370 Eupl-Chr13 28673143 28678583 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01370 38 371 Monolignol Biosynthesis Gene Families AT1G72680 24.269 5.13e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01370 K18857 - qsu:111997180 704.901