Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01342 ATGTATCGGAAAACTCAGAATAGTGGCGTGGTCGTAAAGGGAGATGACGAAATAGAAAACAAAGATTACTATGGTGTCTTGACAGACATAATTCAATTAGATTATTTTGGGAACAATAATGTTTTTCTGTTCAAGTGTGATTGGTGGGACGTCGACAATGAAGGTAGAGGAATCCAAACAGATAAACACAACTACACCAACGTCAATGTCACAAAGAAATGGAATACTAGTGAGCCATTTGTGTTAGCGTCTCAAGCAGAACAAGTTTTTTATGTCAAAGACTCCAAGTTAGGTAATAATTGGCAAGTAGTGGTGAAGACACAAGCTCGAGACTTGTACGATGTACCAGAAGATGAAGATGAAGAGTCGAATGGTGATGATGAGCCATACCAACAAAATGAGTCTTATGGTATAACTAACACATTGAGGGTTAGTGATGATGAATTTGTGGCATGGCAAAGGGACGATATTCCTCCAATACTAGTTGATGCAAATCTTGTAATGCCTGAAGAAGGGGGAGATGGGGATGTTGACACTTTCATTGATGATGAAAGTGAGGATGATTGTACCTTCGTTGATTTTGATACTGAAGAAGATGAAATGAACACTGATGATGATAAGTGTGGGCTCCACGAGAATCGAAAGAAGCATGAGAAGAACATATTTTGCTTGGATTGTTGTCGAAGTATTTGTCCTCACTGTGTTCCTAATCATAGATCTCATCCCCTCCTACAAGTAAGGCGAAACGTTTACCAAGATGTTGTTCGATTGGATGATCTCGAGAAGATCATCAATTGCTCCTATGTTCAGTCGTATACTATAAACAATGCAAAAGTAGTGTTCTTAAATCAGAGGCCTCAAGCTCAGCAAAGGGCGATTTGTAATAAGAGCTCTACCCACTTCTACTTCACCTGTGCCAAGATTCTCCAAGAGCCATTCAATTTCTGTTGCCTTTCATGCAAGGTCGATCATGTGGTGTTAAAAGGGGGAGATATATCATGCATACTACGCAAGTTTAACGTATCTAATCTTTTATTCTCGTTAATCGATGGCATAAGAATGGACAGTTCGGATGTTCTCGAGGATGATGACAAACAGTAA 1101 0.3942 MYRKTQNSGVVVKGDDEIENKDYYGVLTDIIQLDYFGNNNVFLFKCDWWDVDNEGRGIQTDKHNYTNVNVTKKWNTSEPFVLASQAEQVFYVKDSKLGNNWQVVVKTQARDLYDVPEDEDEESNGDDEPYQQNESYGITNTLRVSDDEFVAWQRDDIPPILVDANLVMPEEGGDGDVDTFIDDESEDDCTFVDFDTEEDEMNTDDDKCGLHENRKKHEKNIFCLDCCRSICPHCVPNHRSHPLLQVRRNVYQDVVRLDDLEKIINCSYVQSYTINNAKVVFLNQRPQAQQRAICNKSSTHFYFTCAKILQEPFNFCCLSCKVDHVVLKGGDISCILRKFNVSNLLFSLIDGIRMDSSDVLEDDDKQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01342 366 MobiDBLite consensus disorder prediction 114 128 - -
Eupl13g01342 366 ProSiteProfiles Zinc finger B-box type profile. 203 246 IPR000315 GO:0008270
Eupl13g01342 366 PANTHER DUF4218 DOMAIN-CONTAINING PROTEIN-RELATED 2 155 - -
Eupl13g01342 366 MobiDBLite consensus disorder prediction 112 133 - -
Eupl13g01342 366 Pfam PLATZ transcription factor 247 322 IPR006734 -
Eupl13g01342 366 Pfam Domain of unknown function (DUF4216) 31 104 IPR025312 -
Eupl13g01342 366 CDD Bbox2 207 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01342 Eupl-Chr13 27741751 27752131 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Eupl13g01342 PLATZ 4.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01342 - - nnu:104599692 234.187