Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01339 ATGGCATGGGTTTTCACTCCTTCGCCTGCATCGTTTGCACCATCAAACACCATAAACCCCAGTTCTTCTGGTCAAGGTCAGGGGCAGCAGTTTCCCAATCCTTCTGGCAACCAGCTTGCACAAGATCAACAGCAGCCTCAACAGCTTGAGCCCCAGACCTTCCATCAAGGCCAGCAGTCACTGCAACAGTTCCCCATTTCCCACGCTCAGCAGCAGCAGCAACAACAATATCAATCAATTCGAGGTGGATTAGGAAGTGTGGGGCCCGTTAAATTAGAGCAGCATATGACTAATGATCAGAATTTGCCGCAGCAACAGTTGCAGTCCTTGCGGAATCTGGCTCAGGTGAAATTGGAACCACAACAGATTCAGACACTGAGAGGTTTGGCGCCTGTGAAAATGGAACCCCAGCATTCGGATCAGTCATTGTTTCTGCAGCAGCAACAACAGCAACAGCAACAACAACAGCAACAATTCCTCCACCTGTCCAGGCAGTCTTCTCAGGCTGCCCAGATAAATCTTCTGCAACAACAGCGTCTCTTGCAGCTGCAACAGCATCAGCAGCAACAGCATCAGCAGCAACAGCAAATCTTGAAGTCACTTCCACAGCAACGATCCCAAATATCGCATCAGTTTCAGCCGCCGAGTTTGCCTGTGAGAACTGCTGCGAAACCAGCCTACGAACCAGGAATGTGCGCTCGGCGTTTGACGCACTACATGTATCACCAGCAGCACAGACCCCCAGATAACAATATTGAATTCTGGAGGAAATTTGTTTCGGAGTACTTTGCTCCGCATGCCAAGAAGAGGTGGTGTGTTTCTCTGTACGGAAGTGGGCGGCAAACAACTGGTGTATTCCCTCAGGATGTATGGCACTGTGAAATATGCAATCGGAAGCCTGGTCGTGGTTTTGAAACAACTGTTGAGGTTTTACCCAGGCTGTGCAAAATCAAGTATGATAGTGGTACTTTGGAAGAACTTCTTTATGTTGATATGCCCCGTGAATATCAGAATGCATCAGGTCAAATCGTCCTGGATTATGCAAAAGCAATACAAGAAAGTGTATTTGAGCAACTACGTGTAGTTCGGGACGGTCAACTTCGTATTGTTTTCAATCCAGATCTTAAGATTTGTTCCTGGGAGTTTTGTGCTCGACGTCATGAGGAGCTAATCCCTCGAAGATTGATAATACCTCAGGTTAGTCAGCTTGGGGCAGCAGCTCAGAAATACCAGGCTGCTACTCAAAATGCATCATCCAACTTATCTGCTCAGGAGTTGCAAAACAACTGTAATATGTTTGTTGCATCAGCTCGTCAATTGGCAAAAGCCTTGGAGGTGCCATTGGTAAATGATTTAGGATATACGAAGAGATACGTGCGTTGTCTTCAGATATCGGAGGTGGTTAATAGTATGAAAGATCTGATTGATTATAGCCGAGAAACAGGAACTGGACCTATGGCAAGCTTGATCGAATTCACTCGGAGGAACAGTGCTACATCTGGGCTCCATGGTCAAGGTCAACAACCCGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAGCATTGCTCAGAACTCAAACAATGATCGCAGTTCCCTCCAGGCCGCTTCTGTGCAGTTCGCCGCTAGCAATGGTGTCGTCAGTGTAAATAACTCTCTCAACACCACATCCACCACGACCTCTGCCAGCACCATAGTTGGGCTTCTCCATCAGAACTCCATGAATTCCAGGCAGGAAAACCCATTGAACAATGCGAATAGTCCCTATGGTGGGAGTGCAGTTCAGATTCCGTCTGCCGGTTCCTCGAGTTCACTACCGCAGGCTAAGCCCAATCCATCTTCCCCATTCCCATCACCAACACCATCCGCATCTAACAATCCCCCCCAGACTTCTCATAGTGCCTTACCAGCAGCAGCCACTGGCACCCATATGAGTTCTGCAAATTCACCAGCGAATGTTTCTATCCAACAGCCGGTTCAGTCCAATGAGGCTGACCCGAATGATTCTCAGAGTTCTGTCCAGCAAATCATACAAGAAATGATGATGTCGAGTCAGTTAAATGGAGGGGGTAGCATGGTTGGTGTTGGCTCCTTAGGGAACGACATGAAAAACATAAATGGGATACCTGGCAACACTGTTCTCAACGGTGGGAACTGCCTCGTTGGGAATGGGATAAACAACAATTCAGGTATTGGTGGTGTGGGTTTTGGCAACATGGGTGGTGGAATTGGTCCGTCGTCTACAGCTAGTGGAATTAGAGCAGTCATGGGCAATAACTCCATGACTTTGAATGGTAGAGTAGGCATGCAATCGATGCCGCAGGACCCAAGCATGAACCATCAGCAACAAGATTTGGGGAACCGGCTGTTAAGTGGGCTTGGAGTAAACAGCTTCAATAATTTCCAATTCGATTGGAAACCATCCCCTTAG 2430 0.4798 MAWVFTPSPASFAPSNTINPSSSGQGQGQQFPNPSGNQLAQDQQQPQQLEPQTFHQGQQSLQQFPISHAQQQQQQQYQSIRGGLGSVGPVKLEQHMTNDQNLPQQQLQSLRNLAQVKLEPQQIQTLRGLAPVKMEPQHSDQSLFLQQQQQQQQQQQQQFLHLSRQSSQAAQINLLQQQRLLQLQQHQQQQHQQQQQILKSLPQQRSQISHQFQPPSLPVRTAAKPAYEPGMCARRLTHYMYHQQHRPPDNNIEFWRKFVSEYFAPHAKKRWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFETTVEVLPRLCKIKYDSGTLEELLYVDMPREYQNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFNPDLKICSWEFCARRHEELIPRRLIIPQVSQLGAAAQKYQAATQNASSNLSAQELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMASLIEFTRRNSATSGLHGQGQQPEEQQQQQQQQQSIAQNSNNDRSSLQAASVQFAASNGVVSVNNSLNTTSTTTSASTIVGLLHQNSMNSRQENPLNNANSPYGGSAVQIPSAGSSSSLPQAKPNPSSPFPSPTPSASNNPPQTSHSALPAAATGTHMSSANSPANVSIQQPVQSNEADPNDSQSSVQQIIQEMMMSSQLNGGGSMVGVGSLGNDMKNINGIPGNTVLNGGNCLVGNGINNNSGIGGVGFGNMGGGIGPSSTASGIRAVMGNNSMTLNGRVGMQSMPQDPSMNHQQQDLGNRLLSGLGVNSFNNFQFDWKPSP* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01339 809 MobiDBLite consensus disorder prediction 575 673 - -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 575 609 - -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 9 82 - -
Eupl13g01339 809 Coils Coil 145 165 - -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 498 534 - -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 610 624 - -
Eupl13g01339 809 PANTHER LIM DOMAIN-BINDING PROTEIN 104 794 IPR029005 -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 625 673 - -
Eupl13g01339 809 Pfam LIM-domain binding protein 235 489 IPR029005 -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 194 216 - -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 194 221 - -
Eupl13g01339 809 MobiDBLite consensus disorder prediction 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01339 Eupl-Chr13 27677872 27704235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01339 10 805 C2H2 Transcription Factor Family AT1G43850 56.679 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01339 - - nnu:104606755 1058.13