Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01336 ATGTCTTCTTGGTGGTCAAGAAAATGTCACAAGAGCAAAGAACCACACCACACCCATAGCAGCTGTGACCAACAACAAGCTGCTGCTTCAATCAGAAATGATAAAAAGAACAAAGGCAAAGAGAAACCCAAGAGCTTTGATGAGACTCTCATGCCCCGGAATTCCCTCAGGACTTCTGCTACTGGCTGTTCTTCTGGTTCTGGTTCTGGTTTTGATTCCGATTTGGAGAAGAGGGGTCATCCTCTGCCTCGCCCATCTTTCTCTTCTGCTCCATCTTTGACTCATGATCATGTGGTTGGTTTGGGATCTGGGTCTGTTTCCGTTTCCAGTGTTAGCTCATCTGGCTCTTCCGATGATCCACCTTCTGACTTTGGATTCGTCGGTCTTTACAGGCCACATGGAGAAACTAAGTTCAGCCCAAGATCAAGAAGTCCAGGTCCAGGAACAAGAGGGCCTCCATTTTCCGCATCACCTTTACATCCACGGACGTTTGGTATGAGTCCAGAGTCTCCGACAGGTAAGCTAGAAGATGGGAAGAGTCCATGTCATCCTCTGCCACTTCCTCCAGGTTCTCCAACTAATCCTTGTGCCTCACCCACCAAAAGAAGTAGTGGAGTCAATGAAAATTCACAATCTCTTCGATCAAAATGGAAGAAGGGAAGACTTTTAGGAAGGGGAACATTTGGGCATGTTTATCAAGGATTTAACAGGGACAGTGGACAGATGTGCGCAATAAAGGAAGTCAGGCTCATTTCCGATGATAAGACCTCTAAAGAATGTCTCAGACAACTGAACCAGGAGATAACATTGCTCAACCAACTCTCACACCCGAACATTGTTGAATACTATGGAAGCGAACTGGGGGAAGACACACTCTCAGTTTATTTGGAGTACGTCTCTGGGGGCTCCATTCACAAATTACTCCAAGAATATGGCTCCTTTTCGGAACCGGTTATTCAAACTTACACCAGGCAAATTCTTTCTGGGCTCGCCTACTTACATGGAAAGCATACAGTGCACAGGGATATTAAAGGGGCAAACATACTTGTGGATCCTAATGGTGAAGTCAAGCTTGCAGACTTTGGCATGGCTAAACACATTACATCTTATTCTTCAATGCTCTCTTTCAAAGGAAGCCCTTACTGGATGGCACCTGAGGTTGTAATGAATTCTAGTGGCTACAGCCTCGCAGTAGATATTTGGAGCCTAGGCTGCACAATACTTGAGATGGCAACATCAAAACCACCTTGGAGCCAGTATGAAGGGGTGGCTGCAATATTTAAAATTGGAAACAGCAAAGATATTCCTGAAATTCCTGATCACATTTCTAATGATGCAAAGAGTTTTTTGAAGCTCTGCTTGCAACGGGACCCATCCGCACGTCCTACAGCGGCAAAACTACTGGAACACCCTTTCATTCAAAACCAAGCTGCAGTACAATTTGCAAAGATGAACATAACTAATGATGTCTTTCCTTCTTCCCTTGACGGAAGTCACAGACCGACATCCTCAGAGTTCCGTTCCAACAAAGCAAATATCATCTTACGAGATGGAGACTATGGGATGAAACCTATTGGCACATCTTCAAGAGCTTTGAAGAACCGAAGGGATGATACAAGACTAAACATGTCTTTGCCGGTGTCTCCCTGTTCGAGTCCATTGCGGCAATATGGACCTGCATATAAAAGCTGTTTTCTGTTCGCTTCCCCTCCTCATCCAGCTTATACATTGGTGGGAAAAAGTAGTTATGATCTAAACAATCATTCTTCCTTGTCACCAACACATTACACAAACTATCACACTGATCCTTGGACAGATACACCCCAACTGAAAGCCCAAACACCCAGTGGATCCCCGAGAACAAGACCCATTGAGAAACATATCTGTGAAGTTCAACAGAACATATTCTTCTTGATTATGCAAACTGCCTCAAGGATTACACTGCATACTATTTTGAAGGATTTTGCATTCATACCTCTCCAAAAGTGTGATGGGTGTACAGGTCGGGATTGTAATTGGTTGAGAAAGTCCCGTTTCACTTCTCCATTGAAACAGAACAGTACTTGA 2067 0.4432 MSSWWSRKCHKSKEPHHTHSSCDQQQAAASIRNDKKNKGKEKPKSFDETLMPRNSLRTSATGCSSGSGSGFDSDLEKRGHPLPRPSFSSAPSLTHDHVVGLGSGSVSVSSVSSSGSSDDPPSDFGFVGLYRPHGETKFSPRSRSPGPGTRGPPFSASPLHPRTFGMSPESPTGKLEDGKSPCHPLPLPPGSPTNPCASPTKRSSGVNENSQSLRSKWKKGRLLGRGTFGHVYQGFNRDSGQMCAIKEVRLISDDKTSKECLRQLNQEITLLNQLSHPNIVEYYGSELGEDTLSVYLEYVSGGSIHKLLQEYGSFSEPVIQTYTRQILSGLAYLHGKHTVHRDIKGANILVDPNGEVKLADFGMAKHITSYSSMLSFKGSPYWMAPEVVMNSSGYSLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDIPEIPDHISNDAKSFLKLCLQRDPSARPTAAKLLEHPFIQNQAAVQFAKMNITNDVFPSSLDGSHRPTSSEFRSNKANIILRDGDYGMKPIGTSSRALKNRRDDTRLNMSLPVSPCSSPLRQYGPAYKSCFLFASPPHPAYTLVGKSSYDLNNHSSLSPTHYTNYHTDPWTDTPQLKAQTPSGSPRTRPIEKHICEVQQNIFFLIMQTASRITLHTILKDFAFIPLQKCDGCTGRDCNWLRKSRFTSPLKQNST* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01336 688 MobiDBLite consensus disorder prediction 51 71 - -
Eupl13g01336 688 MobiDBLite consensus disorder prediction 103 120 - -
Eupl13g01336 688 MobiDBLite consensus disorder prediction 1 216 - -
Eupl13g01336 688 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Eupl13g01336 688 SUPERFAMILY Protein kinase-like (PK-like) 214 607 IPR011009 -
Eupl13g01336 688 MobiDBLite consensus disorder prediction 196 213 - -
Eupl13g01336 688 ProSiteProfiles Protein kinase domain profile. 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01336 688 Gene3D Transferase(Phosphotransferase) domain 1 214 505 - -
Eupl13g01336 688 MobiDBLite consensus disorder prediction 33 48 - -
Eupl13g01336 688 Pfam Protein kinase domain 218 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01336 688 SMART serkin_6 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01336 688 CDD STKc_MEKK1_plant 216 473 - -
Eupl13g01336 688 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 27 481 - -
Eupl13g01336 688 FunFam Mitogen-activated protein kinase kinase kinase 215 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01336 Eupl-Chr13 27578566 27584870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01336 1 536 MAP Kinase Kinase Kinase AT1G53570 57.559 2.86e-180 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl13g01336 Pkinase 4.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01336 K04421 - nnu:104599577 801.586