Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01307 ATGGGAGACGACAATGTCAACCTTCCTCCTGGATTCCGATTTAGTCCCACCGACGAAGAACTTGTAGTTCATTTTCTTTATCGTAAGGCAGCACACTTACCTTGCCACCCCGACGTCATTCCCGATCTCGAGCTCTATCCATACGATCCTTGGGAACTTAATGGCAAGGCGTTGGCAGGCGGTAATCAATGGTATTTCTTCAGCCGCCGGACACAAAATCGAGTTTCGGCTAATGGGTATTGGAAGCCATTAGGTGTTGATGAACCAATTGTCACAAGTGCTAGTAAGAAAGTTGGTATGAAGAAATATCTCGTCTTCTATATCGGTGAAGCTCCCATGGGGATCAAAACCAATTGGATAATGCATGAATTTCGCCTCTCGGATTGCGGTTCTAGTAGCAGTAGATCTTCCAAAAAGAGAGGAACACCGAAAATGGATTTGAGTAAGTGGGTTCTTTGTCGAGTCTTCGAGCGAAATGGCGGTGACGATGAAGATGGACCCGAGCTTTCATGCTTAGATGAAGTTTTCTTGTCGTTAGACGATCTCGATGAAATAAGTTTGCCGAATTAG 570 0.4509 MGDDNVNLPPGFRFSPTDEELVVHFLYRKAAHLPCHPDVIPDLELYPYDPWELNGKALAGGNQWYFFSRRTQNRVSANGYWKPLGVDEPIVTSASKKVGMKKYLVFYIGEAPMGIKTNWIMHEFRLSDCGSSSSRSSKKRGTPKMDLSKWVLCRVFERNGGDDEDGPELSCLDEVFLSLDDLDEISLPN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01307 189 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Eupl13g01307 189 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Eupl13g01307 189 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Eupl13g01307 189 PANTHER NAC TRANSCRIPTION FACTOR 56 8 163 - -
Eupl13g01307 189 FunFam NAC domain-containing protein 104 17 161 - -
Eupl13g01307 189 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01307 Eupl-Chr13 26840622 26841928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01307 1 159 NAC Transcription Factor Family AT1G61110 48.000 4.90e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g01307 NAM 5.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01307 - - tcc:18608343 331.257