Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01306 ATGAGTTTACGATCGCTGTTAGAACCCGATGGAGACACCAAAAGGGACGAAATGCGATGCATTTCGTGTCGGGAGAATTATCAGGCACACGACGCCGGTACGTGCAAGGAGTGTTACGAGGAGGCGAGCGAGACAGAGGAGGAACTGAAGAGAGAGATCGAAGACCTAAAAGCCAAGGTCGCCTTTCTCAAATGCTGGTCTCCCGTCGATCACAGCTCATATTGCTTCACTGACGTCGTTCTCGTTGCATCCGACGATGATTGCGGCAAAGGAGTTTCCAACGTCCCGGCACACAAGGCCGTTTTGGTAAGCAAATCTCCAGTGTTCAAAGCGATGCTAGAAAGTGAGATGGAGGAGAGCAGAAGTGGCACCATTAAGATCAGTGATGTGTCTTACGATGTCCTCTGCTCCTTTGTTCACTACTTGTACACTGCAGAGGCGTCTCTCGATGAACAGATGGCCTTTGACCTCTTGGTTTTGGCAGAGAGGTACCAAGTGAAGCACCTCAAGGCATTCTGTGAGAAGTTCATGACGTCGAAGGTGAATGGTGACAATGCGGTCGTGAGTTTTGCCTTTGCGCACCAGCACAATGCCAAACACCTCCTTGAGGCATCTCTATCATTGATCACTGACAACATGGACAAGCTAACAAAGCAGGAGGAGTATAAGGAGCTTGTTGACAAAGATCCTCGCCTCATCGTGGAGATTTATGAAGCATATCTTGCCAAGCAGATCAACACTGCTGCCCCCAAGGATTCTTCTGTGCAGTCATAA 774 0.4922 MSLRSLLEPDGDTKRDEMRCISCRENYQAHDAGTCKECYEEASETEEELKREIEDLKAKVAFLKCWSPVDHSSYCFTDVVLVASDDDCGKGVSNVPAHKAVLVSKSPVFKAMLESEMEESRSGTIKISDVSYDVLCSFVHYLYTAEASLDEQMAFDLLVLAERYQVKHLKAFCEKFMTSKVNGDNAVVSFAFAHQHNAKHLLEASLSLITDNMDKLTKQEEYKELVDKDPRLIVEIYEAYLAKQINTAAPKDSSVQS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01306 257 SUPERFAMILY POZ domain 75 179 IPR011333 -
Eupl13g01306 257 Coils Coil 35 59 - -
Eupl13g01306 257 CDD BACK 184 236 - -
Eupl13g01306 257 Gene3D Potassium Channel Kv1.1; Chain A 44 182 IPR011333 -
Eupl13g01306 257 ProSiteProfiles BTB domain profile. 77 151 IPR000210 GO:0005515
Eupl13g01306 257 PANTHER SPECKLE-TYPE POZ PROTEIN 34 247 - -
Eupl13g01306 257 CDD BTB_POZ_ZBTB_KLHL-like 76 164 - -
Eupl13g01306 257 FunFam BTB/POZ domain-containing protein 183 256 - -
Eupl13g01306 257 SMART BTB_4 77 181 IPR000210 GO:0005515
Eupl13g01306 257 Pfam BTB/POZ domain 75 179 IPR000210 GO:0005515
Eupl13g01306 257 Gene3D - 183 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01306 Eupl-Chr13 26795886 26817869 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl13g01306 BTB 3.7e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01306 K10523 - nnu:104605853 369.777