Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01304 ATGAGGACAGAGGTCTGCAATCATCAGAATCAGATCAGACGGATCAGAACAAATGACAAGATGAAGAAGATGGTTAGAAACGGTATGGACGGAAAAGAAGAAAAGCGTAGTGATGGCCGGACGATAGTAGTGGGAGTGAAGTTGGATCAAGAAAGCAGAGAATTACTAACATGGGCTCTCGTTAAAGTTGCTCAGCCTGGTGATCGACTCATTGTTCTTCATGTCGTCAACAACACCACCGAGGCGGTTTTTGATCCAGACGATAAAACTTCACTCCTATCACTCTTCAAAGCTTTCGATTCTGTTCTCGCTGTCTATGAAGGTTTCTGCAACTTAAAACAGGTAGATCTCAAGCTTAAGATCTGTAGAGGCTTCTCTGTTCGTAAAATTCTGGTCCGAGAGGTGATATCCTATGTTGCCACTAAGCTTATTGTTGGAACTGCTAGGAATCACCGTGCAATCGGGTCCTCATCTTCTGTCGCTAAATACTGCGCGAGGAAACTCTCTAGAGACTGTTGGGTGGTCGCCGTTAATAATGGCAGAGTTGTGTTTCAGAGAGAAGCGAGTACAGGAGTTGATAATCCTCGGCCTAAGAATTTGCTCTGTTCGATTCATCGAACATTGAGTAAGCACTCTAAAGTACTTAATGATTCTGCTGTGGTGTCCGCATCTTATCAAGATCAGGAAAATCACTGGGATTCCATTGCAGAACTACTAAAAGCAGGGTCAGATTGTTCTCAGACTTCCCTGAAACAGAATTGTTCTATATGTACACCAGTCTCTGTTTCGTCGGATACCCATTGTGCCCAACCTTCAGAAGAGAAATACAATGATGGGGGTGAAGACAATTCTTTGGCCTTAGTACCAGTACAGACTGTAGAGGCGGAATCGAGTTCAATCTCACTCCTGATCCAGGAATTGCCCGAGTTGAAACCTGGTTGGCCGCTTCTCCGCCGGGCAATCTTGGCTGACCGGCAAGTGCAAGTCTTGGAGAGACCTCCAGTTAGGAAGATCTCTGTAGTTCAATGGGCAATGCAGCTGCCTAGCCGGAATTCTTGTGTGTCCGTCCATTCTGATCAAAATGAAGATCAGTCTACGAATTTGGATGGAGAGAGCGGTGCGATTGTTCTAGTAGGGAACAATGCTGCAATTCCTCCTTCCTCTCCCCTTCACAAGGAGTTGGAATCACTTCACGACAAGTATTCTTCCACTTGCAGACTGTTCCAGTACCATGAACTCCAGTCTGCAACATCTAATTTCAAGCCTGAGAAGTTGGTTGGAAAGGGAGGAAGTGGTCAGGTTTACAAAGGGTGTCTTCCAGATGGTAGGGAATTAGCTGTGAAAATCATGAAGCCATCTGAAGAAGTAGTGAAGGAGTTTCTTTTGGAAATTGAGATCATAACTGCTTTACATCACAAGAATATCATCTCCCTCTTCGGGTTCTGCTTTGAAGACACCAATCTTCTCTTGGTTTACGATTTCCTATCAAGAGGAAGCCTAGAAGAGAACCTTCATGAGAACAAACTTGAATTCAGTTGGGGAGAGAGACATAAGGTGGCTGTGGGTGTAGCTGAGGCGCTGGACTATCTACACAGTGGCACCCAACCTGTGATTCATAGGGATGTGAAATCATCAAATATCCTTCTCTCTGATGATTTTGAGCCTCAGCTGTCGGATTTTGGATTCGCTAAGTGGGCTTCGACCTCCTCATCCCATATAACTTGCACTGATTTAGCAGGAACTTTTGGATATTTGGCTCCAGAATACTTCATGTTTGGGAAAGTAAATGAAAAGATTGATGTCTATGCGTTCGGGGTCGTGCTACTTGAGCTTCTTTCTGGAAGGAAGCCCATCAACAGTGAGTATCCAAAAGGCCAAGAGAGCCTAGTTATGTGGGCAAAACCTATTCTAAATTGTGGTAAGGTTGCGCAATTGTTGGATCCAAGCTTGGGAGATAATTATGACCACGATCAGATGGAGAGGATGGCTCTAGCTGCTACCCTATGTATCAGACGTGCACCTCGATCTCGACCTCGGATGAGCCTTATCTTGAAGCTCCTCCAAGGTGATCCCGAGGTTACCAAATGGGCCAGGCTACAGGTTGGTGGTGTCTCTGAGGAGTTTGAGGGGCTAGATGATGAATCATTTCCACCTCCCAACATCCAGTCCCATCTTAACCTTGCGTTACTCGATGTGGAAGATGATTCACTCTCAATAAGCAGCATTGAGCAGAGTGTTTCGTTGGAGGATTACTTGCAAGGGAGGTGGAGCCGCTCATCGAGCTTGGATTAA 2292 0.4546 MRTEVCNHQNQIRRIRTNDKMKKMVRNGMDGKEEKRSDGRTIVVGVKLDQESRELLTWALVKVAQPGDRLIVLHVVNNTTEAVFDPDDKTSLLSLFKAFDSVLAVYEGFCNLKQVDLKLKICRGFSVRKILVREVISYVATKLIVGTARNHRAIGSSSSVAKYCARKLSRDCWVVAVNNGRVVFQREASTGVDNPRPKNLLCSIHRTLSKHSKVLNDSAVVSASYQDQENHWDSIAELLKAGSDCSQTSLKQNCSICTPVSVSSDTHCAQPSEEKYNDGGEDNSLALVPVQTVEAESSSISLLIQELPELKPGWPLLRRAILADRQVQVLERPPVRKISVVQWAMQLPSRNSCVSVHSDQNEDQSTNLDGESGAIVLVGNNAAIPPSSPLHKELESLHDKYSSTCRLFQYHELQSATSNFKPEKLVGKGGSGQVYKGCLPDGRELAVKIMKPSEEVVKEFLLEIEIITALHHKNIISLFGFCFEDTNLLLVYDFLSRGSLEENLHENKLEFSWGERHKVAVGVAEALDYLHSGTQPVIHRDVKSSNILLSDDFEPQLSDFGFAKWASTSSSHITCTDLAGTFGYLAPEYFMFGKVNEKIDVYAFGVVLLELLSGRKPINSEYPKGQESLVMWAKPILNCGKVAQLLDPSLGDNYDHDQMERMALAATLCIRRAPRSRPRMSLILKLLQGDPEVTKWARLQVGGVSEEFEGLDDESFPPPNIQSHLNLALLDVEDDSLSISSIEQSVSLEDYLQGRWSRSSSLD* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01304 763 CDD USP_Like 41 175 - -
Eupl13g01304 763 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 389 494 - -
Eupl13g01304 763 ProSitePatterns Protein kinases ATP-binding region signature. 426 448 IPR017441 GO:0005524
Eupl13g01304 763 Gene3D Transferase(Phosphotransferase) domain 1 495 698 - -
Eupl13g01304 763 SMART serkin_6 420 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01304 763 FunFam Putative receptor-like serine/threonine-protein kinase 495 702 - -
Eupl13g01304 763 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 39 178 - -
Eupl13g01304 763 PANTHER OS08G0249100 PROTEIN 100 695 IPR046958 -
Eupl13g01304 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Eupl13g01304 763 Pfam Universal stress protein family 40 175 IPR006016 -
Eupl13g01304 763 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 40 175 - -
Eupl13g01304 763 Pfam Protein kinase domain 422 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01304 763 SUPERFAMILY Protein kinase-like (PK-like) 401 691 IPR011009 -
Eupl13g01304 763 Gene3D HUPs 40 175 IPR014729 -
Eupl13g01304 763 Gene3D Phosphorylase Kinase; domain 1 388 494 - -
Eupl13g01304 763 ProSiteProfiles Protein kinase domain profile. 420 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01304 Eupl-Chr13 26641089 26644790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01304 407 688 Trihelix Transcription Factor Family AT1G68690 46.259 1.39e-77 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl13g01304 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01304 - - nnu:104606678 977.622