Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01274 ATGGGTAGTTTGTTAATACTGTTAGCAGTATTGTTTATCTGTTCTGTAGCCATGAGTTCAGTCTCAGCCACAACCAACATCTCCTCATGTCCCATGGATCTGGGCTATGTGCAAAGAATCCCATGGGACGCCTCACTATGTCAAATCCACCAGAAAAGCACCACCAACGACACAGCAGAGAACTGTTGCACCGCCCTTCTCAGCCTCTTCGGCATCGGCCTCGCCACACACTTGAAAGAGACCTCCCTCTTCAACCTTCCCAACCTCCCCACTGCCGCCGCCTGCGTCGACGACTTTCAATCCAAACTCATTTCCCTCTCTCTCCCTTCCGATCTCACCACCATCTGCTTCGGCAATCCCCAACGCTTCGTCATCGGACCACAAGTCTGTGCCGGTGTCCAGAACAAGCAAGACTGGCTTGACAAGCTCGGACCCTCCACGGGCCTCGACTCCTCCTGTCGATCCGATCTCTCTAGCCCCACCTCTTGTGATTCTTGCCTCGCTGCTGGCTTGAAGGTTCAGAGAAGTTTGATTTCTATTGATGGCAATACCTCCCACGCTATCGATTGCTTTTACTTTGCAATCCTCTATGCCAGCGGTGTCGTTAACGAGTTCGGTCCTGAGAGTACAAGCACTGCTGCCTGTGTATTAGGGCTGCCAATTGACTCTCCATCAGCCTCTGGAAGTAAAAGCCATTCTGCTCTTGTATTCGCCTTGACCGGAGCTGGAGTGGCTGCAGTACTTATGTCTTGTGTGTTGGGCTTGTATTGCTGGTGGGATCGGTGTCGGAAGAAGAATGATTTGGGTGTTGGGTTTCTGGATTTGGAGGAGCAGAGCTCTAAGCTTCGCTTGCGACCCAATACTGGGTCAATCTGGTTCAAAATTGAGGAGCTTGAGAAAGCCACGGATAATTTCTCGCAGAGGAATTTAATAGGCCGTGGGGGGTTTGGAGTTGTGTATAAGGGGACTCTATCAGATGGAACTCCAGTTGCAGTGAAGAGGATCACAGAATCAGATTTTCAAGGCGACGTGGAGTTCTGCAATGAAGTAGAGATCATTAGCAACTTGAAGCACCGGAAGCTTGTCCCACTGAGAGGCTGCTGCATGACTGAGGAAGACGAGGACCAGGCGCGAGGAAAGCAGAGGTATCTTGTTTACGATTACATGCCCAATGGGAACCTCGACATTCACCTTTTCCTCCCGGAGGGCAGTCGACGTGGCAACAGGAAACCACTAAGTTGGCCTCAAAGAAAGAGTATAATCTTGGATGTGGCAAAGGGGCTTTCCTATCTTCACTATGGAGTTAAACCTGCAATCTACCACAGAGACATCAAGGCCACCAACATACTCTTGGATGCAGAAATGAAGGCAAGAGTGGCAGATTTTGGGCTTGCCAAGCAGAGCAGAGAAGGGCAGTCGCATCTTACAACCAGAGTTGCAGGCACACATGGTTACTTGGCCCCGGAGTACGCCCTCTATGGGCAGCTAACTGAGAAGAGCGATGTTTACAGCTTTGGGGTGGTTATTCTAGAGATAATGAGTGGGAGAAGAGCACTCGACTTGTCCTCCTCAGGGTCGCCGCAGACCTTCCTGATTACTGACTGGGCTTGGATGCATGTGAAATCAGGACAGATAGAAGAGGTGCTGAATGCATCACTGCTTAAAGATGGGGATCCCACCAATCCAAACCCCAAGGGGATTATGGAGAGATTTGTGCTAGTTGGGATTTTGTGCGCTCATGTGATGGTGGCTTTAAGACCCACCATCTTGGATGCTCTGAAGATGCTAGAGGGAGACATTGAAGTTCCTCCCATTCCAGATCGGCCATTGCCTCTCAGCCACCGATCCTTTTGCAGCGATGGACATACCTTCAGCATATCACCATCCTTGAGTGGCCCCCAACTAAATAGAGGAGACATGCTCAGGTAA 1929 0.5039 MGSLLILLAVLFICSVAMSSVSATTNISSCPMDLGYVQRIPWDASLCQIHQKSTTNDTAENCCTALLSLFGIGLATHLKETSLFNLPNLPTAAACVDDFQSKLISLSLPSDLTTICFGNPQRFVIGPQVCAGVQNKQDWLDKLGPSTGLDSSCRSDLSSPTSCDSCLAAGLKVQRSLISIDGNTSHAIDCFYFAILYASGVVNEFGPESTSTAACVLGLPIDSPSASGSKSHSALVFALTGAGVAAVLMSCVLGLYCWWDRCRKKNDLGVGFLDLEEQSSKLRLRPNTGSIWFKIEELEKATDNFSQRNLIGRGGFGVVYKGTLSDGTPVAVKRITESDFQGDVEFCNEVEIISNLKHRKLVPLRGCCMTEEDEDQARGKQRYLVYDYMPNGNLDIHLFLPEGSRRGNRKPLSWPQRKSIILDVAKGLSYLHYGVKPAIYHRDIKATNILLDAEMKARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMSGRRALDLSSSGSPQTFLITDWAWMHVKSGQIEEVLNASLLKDGDPTNPNPKGIMERFVLVGILCAHVMVALRPTILDALKMLEGDIEVPPIPDRPLPLSHRSFCSDGHTFSISPSLSGPQLNRGDMLR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01274 642 PANTHER OS01G0750732 PROTEIN 44 605 - -
Eupl13g01274 642 CDD STKc_IRAK 311 598 - -
Eupl13g01274 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Eupl13g01274 642 Pfam SPARK 27 191 IPR043891 -
Eupl13g01274 642 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 389 604 - -
Eupl13g01274 642 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Eupl13g01274 642 SMART serkin_6 305 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01274 642 FunFam probable receptor-like protein kinase At1g11050 271 388 - -
Eupl13g01274 642 ProSiteProfiles Protein kinase domain profile. 305 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01274 642 SUPERFAMILY Protein kinase-like (PK-like) 286 597 IPR011009 -
Eupl13g01274 642 Pfam Protein kinase domain 306 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01274 642 Gene3D Transferase(Phosphotransferase) domain 1 389 602 - -
Eupl13g01274 642 Gene3D Phosphorylase Kinase; domain 1 274 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01274 Eupl-Chr13 24545414 24547965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01274 29 642 Receptor kinase-like Gene Family AT1G11050 63.415 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Eupl13g01274 Pkinase 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01274 - - nnu:104606662 911.368