Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01266 ATGGTGAAGATCAACGACAAGATCTCATCGGAGCAATCGAAATCCATGGCCACATCAAGCAGGAAAAGGAAGTACAAAGGTGTGAGGATGAGGAGCTGGGGGTCATGGGTGTCTGAAATAAGAGCACCAAATCAGAAAACCAGGATATGGTTAGGCTCTTATTCTACACCAGAAGCAGCTGCTAGAGCCTATGATGCTGCACTCTTATGTCTCAAGGGGTCTTCAGCCAATCTCAACTTCCCATTAATCACTTCATCACCTCATCTCCCCGATACCATCATGTCCCCCAAATCTATTCAAAGAGTAGCAGCTGCTGCAGCTGCTAACAATAATTACGATAATGCCACAACCCCTTCTACCCCATCATCTCCCCCTCCTCCACCTCTCTCCTCATCATCGCCGTCCACCTCGTCATCGTCATCGTCTCCACCGTCTGATCACCAGGACGACGATATCTCCTTATTACCATATTGGGCAAATTACAGTACATGCGGCGCCGAAGGACCGACATGTATGGATCCATGGATTGAGTTTGGTGGCCTACAATCGCCCAAGTACGTGGACCAAATGCTAAATGCATGTGCTTTGTTGGCTCCCCCAGTGATGGAAGATTTCTATGAAGAAGGAGATATTCGTCTCTGGGACTTCTGCTAG 654 0.4817 MVKINDKISSEQSKSMATSSRKRKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPLITSSPHLPDTIMSPKSIQRVAAAAAANNNYDNATTPSTPSSPPPPPLSSSSPSTSSSSSSPPSDHQDDDISLLPYWANYSTCGAEGPTCMDPWIEFGGLQSPKYVDQMLNACALLAPPVMEDFYEEGDIRLWDFC* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01266 217 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Eupl13g01266 217 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Eupl13g01266 217 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Eupl13g01266 217 MobiDBLite consensus disorder prediction 1 24 - -
Eupl13g01266 217 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Eupl13g01266 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 156 - -
Eupl13g01266 217 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Eupl13g01266 217 MobiDBLite consensus disorder prediction 1 16 - -
Eupl13g01266 217 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Eupl13g01266 217 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Eupl13g01266 217 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Eupl13g01266 217 MobiDBLite consensus disorder prediction 133 148 - -
Eupl13g01266 217 MobiDBLite consensus disorder prediction 111 149 - -
Eupl13g01266 217 FunFam ethylene-responsive transcription factor ERF014-like 23 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01266 Eupl-Chr13 24192139 24193264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01266 25 216 AP2-EREBP Transcription Factor Family AT1G21910 50.505 2.79e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl13g01266 AP2 3.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01266 - - nnu:104609654 238.81