Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01264 ATGGCTTCTGAACCAGAATTATCAAGAGGCAAACGGGGTAAGATGCCCCTGGGTGAATATCTCTTGGGAGGTGGAAACAGTTTGGCATCCCGAGTCTGCTGCTGGCAAGTCTATGTAAGGTTAATAATAAGCTGGCTTATACTCCTGGGATTGTTAAGCTTCTGTCATTCGTCCATTGGACCTGATATCGAAGGTGAAGCTTTAATTGAGATTCTCAGAGCTCTAAATGATACAAATAAAAGAATTACTGATTGGAATAATTATTTTGTGACCCCATGCTTTAGCTGGTCTCATGTCACTTGTAGGGATGGAAATGTCATATCCTTGAGTTTGGCATCATTTGGATTCTCTGGAACTCTTTCACCTTCAATTACGAAACTAAAGTTTTTGGTTAGCTTGGAATTACAGAATAATTATCTGTCTGGTTTATTACCTGCTTACCTTGGCAGTATGGCACACCTGCAAAACCTGAATCTGGCAAACAATAGTTTCAGTGGTTCTATACCCATTACATGGGGTCAACTTGCCGACCTAAAGCATTTGGTAATAAGCAGGAACAGCTTAACTGGGTATATTCCAGAGTCAATTACGAATATTACAGGGTTAAAAGAACTGGATCTTTCATCCAACAATATGATTGGGAGAATTCCAACACAACTGTTTTCAGTTCCCACATTTAATTTTACAGGAACCCATCTTGATTGTGGCTCTAGCTTGCAGCAACCTTGTGTCTCAAGCTCTTCTATACCAGCTTCAATGAGCAAGTCGAAACTTCGAGTTGTGGTCAGTGCTGCAGCGTGTGGTGCATTCCTACTTCTGTCCATTGGGGCTATCTTTGTACATCGATACTGTCAAGTGCATGAAAAACATGATGTTTTTGTTGATGTTGCTGGTGAAAATGAATGCAAAATTTGCTTTGGACAATTGAGAAAATTTTCATGGCGTGAGCTCCAATTTGCAACAGATAATTTCAGTGAGAATAACGTCATTGGGCAGGGGGGCTTTGGAAAAGTTTACAAAGGTGTTCTCTTAGACAATACAAAGGTTGCCGTCAAACGTCTAACTGACTATCATAATCCTGGTGGAGAGGCTGCATTCCAGAGGGAAATTGAACTGATAAGCGTAGCTGTTCATCGGAATCTTCTTCAGTTGATTGGGTTCTGTACCACCTCATCAGAGAGAATTCTTGTTTACCCATTCATGCAAAATCGCAGTGTTGCATATCGCTTACGAGATTTAAAACCTGGGGAGAAAGGCCTGGACTGGCCCACAAGAAAACGCGTGGCTTTTGGTGCAGCCCATGGCTTGGAGTATCTACACGAGCACTGCAATCCTAAGATTATACACCGTGATTTGAAGTCTGCTAACATCCTTTTAGATGATGATTTTGAGGCAGTTCTTGGAGATTTTGGACTAGCAAAACTGGTCGACACAAAATTGACTCATGTTACAACCCAGGTGCGTGGAACTATGGGACATATTGCACCGGAGTATCTGTCCACAGGAAGATCATCAGAAAAAACAGATGTTTTTGGATATGGTATAACACTTCTGGAACTTGTAACTGGCCAACGTGCAATAGATTTCTCACGCCTTGAAGAAGAGGAAGATGTTCTGCTGCTTGATCATATTAAGAAGTTACTGAGAGAGAGGAGGCTTCACGACATTGTCGATAGCAACTTGAATCAAAACTATGTTCCAAAAGAAGTTGAGATAGTTGTCCAGGTTGCATTATTGTGTACTCAAAGCTCACCGGAGGACCGTCCAAAGATGGCAGAAGTGGTGGGTATGCTGCAAGGGGTGGGACTCATCGAGCGATGGACAGAGTGGGAGCAACTTGAAGTGATCCGGAATCAAGAGTATTCAGTTATGTCCCATCAATTTGTCTGGGATGAAGATTCGACACAGGACCAAGAGGCTATACAATTGTCTGAACCAAGATAA 1944 0.4213 MASEPELSRGKRGKMPLGEYLLGGGNSLASRVCCWQVYVRLIISWLILLGLLSFCHSSIGPDIEGEALIEILRALNDTNKRITDWNNYFVTPCFSWSHVTCRDGNVISLSLASFGFSGTLSPSITKLKFLVSLELQNNYLSGLLPAYLGSMAHLQNLNLANNSFSGSIPITWGQLADLKHLVISRNSLTGYIPESITNITGLKELDLSSNNMIGRIPTQLFSVPTFNFTGTHLDCGSSLQQPCVSSSSIPASMSKSKLRVVVSAAACGAFLLLSIGAIFVHRYCQVHEKHDVFVDVAGENECKICFGQLRKFSWRELQFATDNFSENNVIGQGGFGKVYKGVLLDNTKVAVKRLTDYHNPGGEAAFQREIELISVAVHRNLLQLIGFCTTSSERILVYPFMQNRSVAYRLRDLKPGEKGLDWPTRKRVAFGAAHGLEYLHEHCNPKIIHRDLKSANILLDDDFEAVLGDFGLAKLVDTKLTHVTTQVRGTMGHIAPEYLSTGRSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLLRERRLHDIVDSNLNQNYVPKEVEIVVQVALLCTQSSPEDRPKMAEVVGMLQGVGLIERWTEWEQLEVIRNQEYSVMSHQFVWDEDSTQDQEAIQLSEPR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01264 647 Pfam Leucine rich repeat 153 211 IPR001611 GO:0005515
Eupl13g01264 647 SUPERFAMILY Protein kinase-like (PK-like) 304 598 IPR011009 -
Eupl13g01264 647 FunFam Somatic embryogenesis receptor kinase 1 293 400 - -
Eupl13g01264 647 FunFam Nuclear pore complex protein NUP107 62 218 - -
Eupl13g01264 647 FunFam Somatic embryogenesis receptor-like kinase 1 401 618 - -
Eupl13g01264 647 SUPERFAMILY L domain-like 66 226 - -
Eupl13g01264 647 Gene3D Ribonuclease Inhibitor 61 245 IPR032675 -
Eupl13g01264 647 Pfam Protein kinase domain 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01264 647 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Eupl13g01264 647 ProSiteProfiles Protein kinase domain profile. 324 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01264 647 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 46 608 - -
Eupl13g01264 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Eupl13g01264 647 Pfam Leucine rich repeat N-terminal domain 64 101 IPR013210 -
Eupl13g01264 647 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Eupl13g01264 647 Gene3D Transferase(Phosphotransferase) domain 1 401 618 - -
Eupl13g01264 647 SMART serkin_6 324 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01264 Eupl-Chr13 24096248 24139178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01264 48 647 Receptor kinase-like Gene Family AT5G10290 58.609 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl13g01264 Pkinase 7.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01264 - - nnu:104608488 996.112