Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01260 ATGGAGAGGGAGGCTAACCTTCCGGCCCCACCTTTATCAACCAAGGACGAGGCACACTCCTCTCGCCCCTTCACCTCTTCGTCTTCACCTCCGGATTTCCTCCGGCATGTTCAAGCCGCTTTCAAGCGTCACAGACCTCTCGGTACAATGCAGCCCAGTCGTATTCAGCCAAGACGTATTTTGGTTCCCCGAAGAGAACCATCCGAAACCTCTGCTTTTGATGATGACACCGAGAAATCACAAGATGTGGTGTCAAGACCGGATAACACCGCACAAGAGTTGATTGAGCAGAGGAAGAGCGACGTAATTGTTTCTGAAGTTCCAGACGATTCGTCAATTTCTCCGCCTTCCATTATTGAGACTATAACAAAAACCTACGACAATAACATGACCGCCTTTGGTGTGCAGAGAGATGAAACTAATCCTAGACATGATCGTGAAGACAATGATGTAATTTTGTCATCACATGTTGCACCTCAACACATCTCAGCCATCGATGGTCAGAAGAAGGTTCAGTTTTCTTTGGGAGGAAACTCGAATTCCCAAAGGGCCGATGAACGAATGGCCACTAGTATGGACAATTTGTCGTCTCATATGAGTTCTCTTGCATTGACAGAGATGGAATGGGATGTGAGCAGTCAGGTTGACATTGCAACTGTTAATGATCACTATCTGAAGCAGCGGGACTTTCAGCACGTAGAAATGTCTGACATCAGTTTGAGGTCAGATGGTGGGATATCTTCCTTGATGGCGAAGAGAAGTATGCTGGTGCAGGATCAGCAGCACCAATTCATGGAGTTTCTTGGGAAGGACGGAAGCCATCCCATGACTCAATCTTTGGTTGCGGGTTCATCATGTGCGACTACAACGTCAGTCCATTCAAGATCTGCTCCCATGCTGAATTCTACGACCTATAGCTCTCGTTCATGTCAATATAGTGGTTCTCACATGGAAACAGAACCTTTGGAAGAGATTAATGTGAACCGTGGTCTTATAACTCAAGGAGATATAGTGCAGCCATCGTGTCCCACATTCCACAGTGCCAGTGGAATATTAGCTGACCAGACAGCCGCTCCAACCCAAGTGTCTGGATCTGTTCTAGAGACACCAATGGAAGTTAGAGATCACCTGTCAGTGGGGCAAGAAGGCTGCGCATTGAAGGAGAGTGATGGGTTGGGAGATGGATTTGCCGACCATGCTAAGGGTCTGGGTCATTTTGAAGAAAAGTCAACTGAAGCAAAAGGGTTTCCAGCTGATGTTACCGACGTACAATCTCAGGCTCCTCTGAGGAAAAAATCATCCTCAAATGTGAAACTGGAGCCTTCTAAAACTGATAAACCAGAAAAGGTTGTAAGTGGCAAAGGAGCATCAGCACCTCGTAAGAAAAGTTTTGATCAAGATTTATTCTTTAAAGTTAACCGAAAGCTCTACCAAAAGCTTGGGAAGATAGGCAGTGGAGGAAGCAGTGAGGTTCACAAGGTCATATCATCAGACTGTACTATCTATGCTCTTAAAAAGATCAAGCTTAAAGGTCGTGATTACTCTACTGCTTTTGGGTTTTGTCAGGAGATTGAGTACTTAAACAAGCTGAAGGGTAAGAACAACATTATACAACTGATTGACTACGAGGTGACGGACAAAATTTTGCACGAGGAAGTAATGAATGGCTTCATGAATATCAAAGATGGCAGAATCAAGGATGATGGATATATTTACATGGTACTTGAATATGGAGAAATCGATTTGGCTCATATGCTGTCGCAGAAGTGGAAAGAAATGGAGAACTCCAATTGGAGTATAGATGAGAACTGGCTTCGGTTCTATTGGCAGCAAATACTTCAAGCTGTAAACACGATACATGAGGAGCGCATTGTGCACTCTGACTTGAAGCCAGCTAACTTCCTTCTCGTCAGAGGTTCACTGAAGCTGATTGATTTTGGAATTGCCAAAGCTATAATGAGTGATACGACAAACATCCAACGAGACTCACAGGTGGGTACATTGAGCTACATGTCTCCAGAAGCATTCATGTGCAATGAGAACGATGCAAATGGAAACACTATTAAGTGTGGTCGACCATCAGATATCTGGTCCCTCGGCTGCATTCTGTACCAAATGGTCTATGGGAGAACACCATTTTCAGAATACAAGACATTCTGGGCCAAGTTCAAGGTCATAACAGACCGAAACCATGAGATTACGTATGAACCAGTTTCAAACCCATGGCTACTTGATCTTATGAAGAAGTGTCTTGCATGGGATCGCAATGAAAGATGGCGGATACCTCAGCTGCTTCAACATCCCTTCCTTGTTCCTCCAATACCATCCCAGCTGTCGTCGCCCAAAGATCAAAGCTGTAAAATGCTTCAGCAGATTGTGGAAGCTTATGGGAATGATCATGAAGCATCCAGGCTGTGTACTCAGCTCCAACAACTCCTTACAGACCCTGTCCCTCATATAACATCTCATTTGTCCGCATCACAAGACCAACAATGTAGGTTGCTGTCGCAAATGTCACGGCTTTGCTCTCAACTCGAGCAACGCCTAGCAAACCTTGGGAAAGGGGTAACAGATCCGAGCATGTAA 2586 0.4497 MEREANLPAPPLSTKDEAHSSRPFTSSSSPPDFLRHVQAAFKRHRPLGTMQPSRIQPRRILVPRREPSETSAFDDDTEKSQDVVSRPDNTAQELIEQRKSDVIVSEVPDDSSISPPSIIETITKTYDNNMTAFGVQRDETNPRHDREDNDVILSSHVAPQHISAIDGQKKVQFSLGGNSNSQRADERMATSMDNLSSHMSSLALTEMEWDVSSQVDIATVNDHYLKQRDFQHVEMSDISLRSDGGISSLMAKRSMLVQDQQHQFMEFLGKDGSHPMTQSLVAGSSCATTTSVHSRSAPMLNSTTYSSRSCQYSGSHMETEPLEEINVNRGLITQGDIVQPSCPTFHSASGILADQTAAPTQVSGSVLETPMEVRDHLSVGQEGCALKESDGLGDGFADHAKGLGHFEEKSTEAKGFPADVTDVQSQAPLRKKSSSNVKLEPSKTDKPEKVVSGKGASAPRKKSFDQDLFFKVNRKLYQKLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYSTAFGFCQEIEYLNKLKGKNNIIQLIDYEVTDKILHEEVMNGFMNIKDGRIKDDGYIYMVLEYGEIDLAHMLSQKWKEMENSNWSIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVRGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNENDANGNTIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDRNHEITYEPVSNPWLLDLMKKCLAWDRNERWRIPQLLQHPFLVPPIPSQLSSPKDQSCKMLQQIVEAYGNDHEASRLCTQLQQLLTDPVPHITSHLSASQDQQCRLLSQMSRLCSQLEQRLANLGKGVTDPSM* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01260 861 PANTHER MIXED LINEAGE PROTEIN KINASE 23 801 - -
Eupl13g01260 861 MobiDBLite consensus disorder prediction 59 83 - -
Eupl13g01260 861 Pfam Protein kinase domain 477 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01260 861 SMART serkin_6 477 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01260 861 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Eupl13g01260 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Eupl13g01260 861 Gene3D Transferase(Phosphotransferase) domain 1 590 773 - -
Eupl13g01260 861 FunFam serine/threonine-protein kinase mph1 isoform X1 591 773 - -
Eupl13g01260 861 CDD PKc_Mps1 475 770 IPR027084 -
Eupl13g01260 861 FunFam Dual specificity protein kinase TTK 470 579 - -
Eupl13g01260 861 ProSiteProfiles Protein kinase domain profile. 477 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01260 861 MobiDBLite consensus disorder prediction 18 33 - -
Eupl13g01260 861 Gene3D Phosphorylase Kinase; domain 1 470 579 - -
Eupl13g01260 861 MobiDBLite consensus disorder prediction 408 459 - -
Eupl13g01260 861 SUPERFAMILY Protein kinase-like (PK-like) 472 780 IPR011009 -
Eupl13g01260 861 MobiDBLite consensus disorder prediction 436 450 - -
Eupl13g01260 861 MobiDBLite consensus disorder prediction 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01260 Eupl-Chr13 23944846 23967805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01260 482 783 MAP Kinase Kinase Gene Family AT1G51660 28.896 5.62e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Eupl13g01260 Pkinase 1.9e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01260 K08866 - nnu:104608538 1162.13