Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01250 ATGGTTTTGAGATATCGAGGGCTGTTGACGTTTAACATTTCAAATAATTTTCGGCCGAAGGTGGAGTATTTCTTGAATGAGATGAAGGGGGATTTGGTGGAGATGAAAATTTTTCCACAGTACTTCTCATTTAGCTTGGAGGGTAAAATAAAGCCTCGGCATTGTCTATTGGTTGAGCATGGGTTCTCGCTACCATTGTCAGAGATGTTGAAGGTTAGTGACGGGGAATTCAATGACCAGTTGGTAGAGATGAGATTGTGGTCTGTTGATGAGAAATTGTTGTTGTAA 288 0.4062 MVLRYRGLLTFNISNNFRPKVEYFLNEMKGDLVEMKIFPQYFSFSLEGKIKPRHCLLVEHGFSLPLSEMLKVSDGEFNDQLVEMRLWSVDEKLLL* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01250 95 SMART mt_12 32 63 IPR003690 GO:0003690|GO:0006355
Eupl13g01250 95 SMART mt_12 1 31 IPR003690 GO:0003690|GO:0006355
Eupl13g01250 95 Gene3D Transcription termination factor 3, mitochondrial 1 89 IPR038538 -
Eupl13g01250 95 PANTHER CGI-12 PROTEIN-RELATED 4 83 IPR003690 GO:0003690|GO:0006355
Eupl13g01250 95 Pfam mTERF 1 77 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01250 Eupl-Chr13 23330894 23331181 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl13g01250 mTERF 3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01250 K15031 - nnu:104598104 160.614