Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01239 ATGGACCTTCGCTTCTTTTCTTTGCTCTTTCTGTTTGAGAAAAAGGTTTCTTTTGGAACTGTAGCAAGAGCTTCCACCGCTTGCTCTTCTCATCTCCCTCTTCTTCCTCTTCCCTTCGGTGGGTTCCTAACCAGTTGTTGCCACTGCGATCTCCAAGCTCTTCAAACACAGTGTCCGAGACCAATTGAAGCCGACACTGTATTTTCTCCGAATGTTAGGGTTTGTGGGACTGCATGCAATTACGTGCCAAACGACTTTGCTTTTGGTGTCAAGCATCTCGACACGCTTGTACTTAAGCTTGATTATCTCCGAAGTTTGGGATTTTCGTATAGAGAGGCGGTTAAGATGGTTTTGAGATATCGAGGGCTGTTGACGTTTAACATTTCAAATAATTTACGGCCGAAGGTGGAGTATTTCTTGAATGAGATGAAGGGGGATTTGGTGGAGATGAAAATTTTTCCACAGTACTTCTCATTTAGCTTGGAGGGTAAAATAAAGCCTCGGCATTGTCTATTGGTTGAGCATGGGTTCTCGCTACCATTGTCAGAGATGTTGAAGGTTAGTGATGGGGAATTCAATGACCAGTTGGTCGAGATGAGATTGTGGTCTGTTGATGAGAAATTGTTGTTGTAA 633 0.4344 MDLRFFSLLFLFEKKVSFGTVARASTACSSHLPLLPLPFGGFLTSCCHCDLQALQTQCPRPIEADTVFSPNVRVCGTACNYVPNDFAFGVKHLDTLVLKLDYLRSLGFSYREAVKMVLRYRGLLTFNISNNLRPKVEYFLNEMKGDLVEMKIFPQYFSFSLEGKIKPRHCLLVEHGFSLPLSEMLKVSDGEFNDQLVEMRLWSVDEKLLL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01239 210 Gene3D Transcription termination factor 3, mitochondrial 48 203 IPR038538 -
Eupl13g01239 210 PANTHER CGI-12 PROTEIN-RELATED 94 198 IPR003690 GO:0003690|GO:0006355
Eupl13g01239 210 SMART mt_12 114 146 IPR003690 GO:0003690|GO:0006355
Eupl13g01239 210 SMART mt_12 147 178 IPR003690 GO:0003690|GO:0006355
Eupl13g01239 210 SMART mt_12 76 109 IPR003690 GO:0003690|GO:0006355
Eupl13g01239 210 Pfam mTERF 96 192 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01239 Eupl-Chr13 22786559 22790418 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl13g01239 mTERF 8.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01239 K15031 - nnu:104598104 190.274