Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01229 ATGAGATCATTTGGTTCATTTCAGTTGCTTTTGATCATTTGGGGAGTTCTTTTTGTGTGCTGTGATTCTTTTGCATCTAATGAAGTTTGGGCTCTTACAGCCTTCAAGGGAGCTATATATGAGGATCCTTTTTTGGTATTGTCGAATTGGAATGTTTTCGATGCAGATCCTTGCGAGTGGTCGGGCATCTCCTGTTCAGCAACCCGTGATCATGTCATCACTCTAAATCTTTCTAGTTCATCTTTGAGAGGATTTCTTGTACCAGAATTGGGCTCATTGTCCTCCTTGCAAGAACTAATTCTGCACAAGAACAATTTCCTGGGGACGATAGACAAAGAGATTGGCATGTTGAAAAACCTCAAGGTCTTGGATTTGGGGATAAATCAACTTTCAGGGACCATTCCTCCTGAGATTGGAAATTTGACCAGCGTTAAAAAAATAAACCTTCAATCTAACGGATTGACTGGGAATGTGCCCCCTGAGCTTGGGAATTTGAGGAACCTCATTGAACTTCGGTTGGATAGAAATAAATTTCAAGGAACTATTCCCGGAAGCAACAACTCAAGTTTCACATCTAACGTGCATGGGATGTATGTCTCTAATGGAAACACCACAGGCTTTTGCCGTTTATCTCAGTTAAGAAATGCAGATTTCTCATACAACTTCTTTATTGGGAACATACCACAGTGCCTGAAGTATCTTCCGAGATCAAGTTTTCAAGGAAACTATTTCCAAGACACAGATTCCAAGCAGCGTCCTATTCAGCAACGTGGTGCTACTCCAAATGCAAAAAGTCATCAAGGAGCCAACCGAGAGAACTGGCGTGCTAAAGATAAATCTAAGCATCCTGGGGCATCAAAACCTGCATGGCTGCTAGCTCTGGAAATTGTAACAGGGACCATAGTGGGTTTCCTCCTACTCTCTACTTTTCTAACAGCTGCTACAAAATGTAAAGGGAGATCTTCGGTCATAATCCCTTGGAAGAAAGTGGCAAATGGAAAGGACCAGATAATATCATACATGGATGCCGAGATGCTGAAGGACATAGTGAATTTGAGCAGACAGGAGCTTGAAGTAGCCTGTGAAGATTTCAGCAACATTATTGGTTCCTCTCCAGGCATTCTAGTCTACAAAGGCACCATGAAAGATGGGCTAGAGATTGCAGTGATATCCCTGTGCAGCGAGGATGAGCACTGGACGGCCTCTCTTGAGCTTTATTTTCAAAGAGAGGTCAAAGATTTGGCAAGATTAAATCACGGGAACACTGGAAAATTACTAGGCTATTGCAGAGAAAGCAATCCGTTTTCAAGGATGCTTGTCTTTGAATATGCATCAAATGGGACACTGTGCGAGCATCTCCACTATGGTGAAGGATGTCAATTATCTTGGACGTGTCGCATGAAGATCATTATTGGCATTGCTCGTGGTCTAAGATATTTGCACATGGAACTTGAGCCTCCATTCACTATATCTGAGCTAAATTCTGGGGCTGTCTATCTTACAGAAGATTTTTCTCCCAAGGTCTGTGCAAATAAAGTTCAAGAACTTACCAAATCAAATGAACACAGTCAGGACTCAGTCGAGTTAAGATGTGACTCAGTTTTGTTTTAA 1611 0.4196 MRSFGSFQLLLIIWGVLFVCCDSFASNEVWALTAFKGAIYEDPFLVLSNWNVFDADPCEWSGISCSATRDHVITLNLSSSSLRGFLVPELGSLSSLQELILHKNNFLGTIDKEIGMLKNLKVLDLGINQLSGTIPPEIGNLTSVKKINLQSNGLTGNVPPELGNLRNLIELRLDRNKFQGTIPGSNNSSFTSNVHGMYVSNGNTTGFCRLSQLRNADFSYNFFIGNIPQCLKYLPRSSFQGNYFQDTDSKQRPIQQRGATPNAKSHQGANRENWRAKDKSKHPGASKPAWLLALEIVTGTIVGFLLLSTFLTAATKCKGRSSVIIPWKKVANGKDQIISYMDAEMLKDIVNLSRQELEVACEDFSNIIGSSPGILVYKGTMKDGLEIAVISLCSEDEHWTASLELYFQREVKDLARLNHGNTGKLLGYCRESNPFSRMLVFEYASNGTLCEHLHYGEGCQLSWTCRMKIIIGIARGLRYLHMELEPPFTISELNSGAVYLTEDFSPKVCANKVQELTKSNEHSQDSVELRCDSVLF* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01229 536 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
Eupl13g01229 536 MobiDBLite consensus disorder prediction 245 285 - -
Eupl13g01229 536 Gene3D Transferase(Phosphotransferase) domain 1 444 532 - -
Eupl13g01229 536 Gene3D Ribonuclease Inhibitor 139 265 IPR032675 -
Eupl13g01229 536 Gene3D Phosphorylase Kinase; domain 1 337 443 - -
Eupl13g01229 536 MobiDBLite consensus disorder prediction 270 284 - -
Eupl13g01229 536 SUPERFAMILY Protein kinase-like (PK-like) 349 509 IPR011009 -
Eupl13g01229 536 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Eupl13g01229 536 Pfam Protein tyrosine and serine/threonine kinase 376 482 IPR001245 GO:0004672|GO:0006468
Eupl13g01229 536 MobiDBLite consensus disorder prediction 245 269 - -
Eupl13g01229 536 ProSiteProfiles Protein kinase domain profile. 362 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01229 536 SUPERFAMILY L domain-like 26 235 - -
Eupl13g01229 536 PANTHER PROTEIN MALE DISCOVERER 2 18 524 - -
Eupl13g01229 536 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Eupl13g01229 536 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Eupl13g01229 536 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01229 Eupl-Chr13 22478187 22486337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01229 8 516 Receptor kinase-like Gene Family AT5G67280 26.622 5.39e-46 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Eupl13g01229 PK_Tyr_Ser-Thr 9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01229 - - ming:122081153 749.584