Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01226 ATGCAAATCGATCTGTCTCTGAAGATGGATGGACAAGAAAGAAAAGATGGTGAAGAGGACGAAGAAGTTCCAGTAGATGAAGATCAAGAAGAAGAAAACTATTCAGACGAAATCGATGGAAAAGAAGCAGCAGAAAGAGAAGAAGAAGATGCATCACTGGAGAAATCCTTGCAACATAACATGAAGACACAAGAGTTATGTGTGTTACAGATGGAGATGCACCGAATGAAAGAGGAAAACAAAGTGTTGAGGAAGGTGGTTGAGCAAACCATGAAAGATTACTATGATCTCCAAATGAAATTCGCAGTCATCCAACAAAACGAAACAAAAAAAGACCCTGAGATCTTTCTCTCGCTCCATGGTGATGATGACACAATTCAAGAATCGAAGAGTTTACCTGAAAATCAAATACGACGTCCATCACCATTTCAAGGCAATAGTGAGGCTCGAGAAGCTACTGAATTAGGATTGTCGTTGAGGCTTCAAACACATGTGCACCAACTTGAAAGAGAAGAAACTAAAGAAGAGAACAAGGAAGAGATGATAAGTTTAGCTCCAGCACATAAGCTACAGAAGAGTGAATTGGCGGGAATCACAAGTCATATTGCTTCCCCACCCAACAGAAAAGCTAGGGTCTCCGTCAGAGCAAGATGCCAAGAACCCACTATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAAATTGCGAAAGGAAACCCTTGCCCGAGGGCTTATTATCGTTGTACAGTAGCACCTGGATGCCCAGTGAGAAAACAGGTGCAAAGATGCCTAGAGGACATGTCGATACTCATAACAACCTATGAAGGCACACACAATCATCCACTACCGGTCGGTGCGACCGCGATGGCTTCTACAACATCTGCAGCAGCTACTTTTATGTTGTTATCCGGTGTAAATTCGAGTAATCCCAGTTCAGACGGCATCGCCGCCGACAACACCCAAGCACCTATTTCTCACCATAATTCTTATCCAACAAACCATTCTACTCCCCTTTCAGCAACCATGAACAGAATCTTCAATCCCAATGATCCTTCTAAAGGGGTCATTCTTGACCTAACCAACAATTCTTGTGGTCCACAACAATTCACCATCCCCAGCTCTTCACATTCACTGCCACAATTGAATTATCCTTGGCTACCTAGCAACTCAGGCTACCATAATGATGGTACAATCGTTAATATGAGTGATTTAGCTAGTGGTCGATCGATGGATAAGCGGGAGTGGAAGGTCAAAGAAGATAAGTCGTTAGCCGAAAACGTGAGTGCTATTGCTTCAGATCCTAAGTTTAGAGTTGCCGTTGCGGCTGCCATCACCTCATTCATTAGTAAGGAAAGCAAGACAGTTCAGCCTAATGGACCTTCATTGGTTCTTAGGGATGGGGACAATGCAAGCTCTAGCAGCAACAAATGGGTTGTTGAATCTCTCTCCCCTTGTGGTAAGCCAATTCGGCATTTGCAGTGA 1485 0.435 MQIDLSLKMDGQERKDGEEDEEVPVDEDQEEENYSDEIDGKEAAEREEEDASLEKSLQHNMKTQELCVLQMEMHRMKEENKVLRKVVEQTMKDYYDLQMKFAVIQQNETKKDPEIFLSLHGDDDTIQESKSLPENQIRRPSPFQGNSEAREATELGLSLRLQTHVHQLEREETKEENKEEMISLAPAHKLQKSELAGITSHIASPPNRKARVSVRARCQEPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTTSAAATFMLLSGVNSSNPSSDGIAADNTQAPISHHNSYPTNHSTPLSATMNRIFNPNDPSKGVILDLTNNSCGPQQFTIPSSSHSLPQLNYPWLPSNSGYHNDGTIVNMSDLASGRSMDKREWKVKEDKSLAENVSAIASDPKFRVAVAAAITSFISKESKTVQPNGPSLVLRDGDNASSSSNKWVVESLSPCGKPIRHLQ* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01226 494 Coils Coil 73 93 - -
Eupl13g01226 494 MobiDBLite consensus disorder prediction 16 38 - -
Eupl13g01226 494 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 456 IPR044810 GO:0003700
Eupl13g01226 494 SMART WRKY_cls 223 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01226 494 MobiDBLite consensus disorder prediction 1 59 - -
Eupl13g01226 494 MobiDBLite consensus disorder prediction 456 478 - -
Eupl13g01226 494 ProSiteProfiles WRKY domain profile. 218 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01226 494 Pfam WRKY DNA -binding domain 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01226 494 SUPERFAMILY WRKY DNA-binding domain 217 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g01226 494 Gene3D WRKY domain 208 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g01226 494 MobiDBLite consensus disorder prediction 39 56 - -
Eupl13g01226 494 FunFam probable WRKY transcription factor 31 208 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01226 Eupl-Chr13 22286400 22288336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01226 27 355 WRKY Transcription Factor Family AT1G68150 48.485 1.43e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl13g01226 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01226 - - nnu:104588731 542.347