Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01219 ATGACTGGAAGCCGATGCCATCGCCGTAAGATGATGGGTAGGGGTGCGGAGGGAGGTTGTGGTACCGAAGAGAAGCCTTGTCCTATTTCTAGGGTTCCCAACAAACAGGCCGTGAGTCGTCAAGACGTCGATATCGATTTCTACTTTCAGGCTCGGAAGGCTCTATGTGAGCGTTCCCCCTTCGATTCTGACGATGTAGTCGCCTCTAGGGTTTCTACACTTCCCGTTGGCTTGGCCGATTTCTTGTCCAAGTACTACCAGAGTCGTAAGAGGCATAAGAGATCTCATTCGGAATCGGGTGGACATGCTCCGGTTGCTCAGCCTCACTCTTCCAACATTTGGGCTGACACCGAGGATTACTTCAGACCCCTGACGTTGTTCGATATTGAGAATTTGGTCGCGCAGTCGTCGTTTAGTTGTTTGGCTACTCAGTCTTGTTTTTCTATTCCGTCCGTGCGGAGAGTTGTCCTTGAAAATGTGGTTTCTGCTGCCAATGTAGCAGTTGAAGTTGGTTTGGACTCGGCGGTTGTTGTTGAAGAGGTGGTGAAGAAGGAGAAGGAGAAGGAGGAGGAGGGGGAGGAGGAGGAGGAACATTATATGGAAATTGATGGCGGGGGAGCTGATGATTTGCCTTCGAAGGAAACAGAGCAATTGTCAATGCCATCTTCACCATCATCTTCGAGTGATTTACAGTGGTTGTTGGGTGCCAGGAATAAGATTCTGCTCACCTCTGAGCGTCCTTCCAAGAAACGGAAGCTTTTGGGCAGTGATGCAGGCTTAGAGAGACTTCGCATTGTTGAACCTTCAGAAGGACAGGATTCTCCTGTGTGCCACTTGTGTTGCTTGGGCGACACCAGTGAACAGTCAAACCAGTTTCTGGTCTGTGATTCTTGTAATGTTGTGGTCCATCAGAAGTGCTACGGTGTGCAAGATGTTCCGGTCAGGTTGTGGTTGTGTTCTTGGTGTAAGCAGAGGGATTGTCCCAAAACGGGTAGTGATGGCAATGACTTGTTGTTGAGGCCTTGCTTGCTTTGCCCCAAACCTGGTGGTGCTTTAAAACCTGTGGCCAAGGATGCTGCTGAAAGCAAAAATGGTGGCCTTGTGAAGTTTGCCCACTTGTTTTGTAGTCAATGGATGCCTGAGGTTTATGTAGAGGACACAAGGACAATGGAGCCAATTATGAATGTCGAAGGAATAAAGGAGACACGGAGAAAATTAGTTTGTTATTTGTGCAAGGTCAAGTATGGTGCCTGCGTTCGGTGTAGTCATGGAACTTGCAGAACTTCGTTCCATCCTATATGTGCAAGGGAGGCGAAACATAGAATGGAGATTTGGGGAAAGATTGGATGTGATAATGTTGAATTGCGGGCGTTTTGCTCTAAGCATTCAGAATTTCAAGATATTAATAGTACCCAACAATTTAAAAACCATCTGTCAGCGGCAATTGGCTGTGATTCTCCTGTATCCAAGCATTCGCCTGCAACGTTGCTGGTTAACAAACCACAGAAGTTAAAGCTTGGGCCCAAGAATGGAGACAAAAGCAAGGTCCATGTCAAGACAGATGGTAATTCTGGTAGATTGGGGAATAATGAGATACCATTGGAACACAATATGTTGCCTACTAGACCAAATACTAGGCTTAGGTCAGAATGTGGTGATGCACAATTATGTGGCAGCATGGAGACACCTGAGAGGAGCAACAATGGGGATATTAACTCATCTGATTCCCTAGATTTTGTACAAGCTCTGAAGAAGTTAATTGATCGAGGAAAAGCCATTCTGAGTGATGTGGCATTAGAGATTGGCATTTCATCTGATTTGTTGGCAGCAACTCTTGCGGGTGACCATCCCTCCTTTTTCCCTGACTTGCGATGCAAAATAACCAAGTGGCTTCGAAGTCGTGCTTATATTGGTACTTACCAGCAAAATTGGAAAATTGGAAGCAATTCTGCAGTTTCATCTAGGGCTAGGGTAGCAGGGCCTGATGATCTTAATTATTTTGCAATAGCAGGTTTGGGTAATTCAGATGCTGTCCCTGTTAAGTCAGTACCACCAAGACGAAGAACAAAAAGTAACATAAGGATTTTGAAGGATAACAAAGCAGTATGCTCGTCTAAGGAAACATTTGTACAGCAAAATGACAGTGGAATAGTGATAGACGAAGTTAATGAAAATCCACTTGTTCTGAATGGAGACTTAAAAGAAGATGTTACCGGTAATGGATCTCTTTTTTCGGATGTCGATCTTCGGTTTAAAGATAAAGATGTCATCGAAAAGATACTGGCTGAGCCTTCAGGCAATCAAGACTTGGGTTCTTCTGTAGGGCAATCGGCTGGACCTGAAGCAAAGCTTGCTGACTGCTGCACATCTGAGAATGGTCAAGCAGAGGAGACGGAGATTTCTGTGCGGAATACTTTGCTGAATTCTAATGAGGAGCATCCTGTTTCTTCTGTTGATGCAGTGACTCCGGTTGCACCTGATCTCATAGGTGGAGAATCAGCTTCCAGTTCTTATATTCACCCGTTTATCCGTAATAGATTGATGCAAATGCAGAGCAGCACGTTTTTCAAGCAGGAAAACACTCCTGAGTGTTTTGGGCCAAGAGAAAAAGGCATGGCTTCTGTTCAAACACCTTGCCCTGCAAGTGTTTGCTGTAATCATCAAGATCGTCATCCCACTTGCACTGACACAAATTGTACATCAGAAGCTGTGAAATTGGAACAGTTGGTTAAGGCTAGAAAGATGGGAATCTTGGAGCTATCACCAGAAGACGAAGTGGAAGCAGAACTTATTTACTTTCAGAATAGGCTACTTGACCAGGCTGTTGCATGCAAGCGCTATTGTGATAAAATAATTTTTAGGATCGTAAAAAGTCTTCCACAGGAGCTTGACGCTGCAAGGAATCAAAGATGGGATTCATTACTAGTCAACCAGTATCTTTGTGGGCTTAGAGAAGCAAAGAAGCAGGGGAGGAAAGAGAAAAGGCATAAGGAAGCCCAAGCAGTGCTTGCTGCTGCAACTGCTGCTGCAGCAGCTTCTTCACGGATTTCATCGTTTAGGAAAGATGCGCATGACGAAGCTCATCATGAGAGTCTTTTGAGGGTAAATGCTGTCAGTGGGAGGACTGGGCCCTACTCTCAGATGATGCCACGAGCAAAGGAGACACTCTCTAGGTTGGCTGTTGCAAAGGTTTCATCAGAAAAGCACTCCGATATCACTCCGTTAACCTCGGGCTTTTCAAAAGAACATCCACAATCATGTGACATCTGCAGAAGATCTGAGACAATATTTAATCCGATCGTAGTTTGTTGCAACTGCAAGGTTGCAGTCCACTTGGGTTGTTATCGTAGTGTTAAAGATCCTACTGGCCCATGGTACTGCGAACTGTGTGAAGAGCTGTTGCCATGTACAAGCCCTAGAGCTCCACTTGTAAATTCTCGGGAGAAGCATTGTTTTGTTGCGCAGTGTGGATTATGTGGTGCTACTACTGGTGCTTTTAGAAAGTCAACTGATGGCCAGTGGGTTCATGCCTTCTGTGCTGAGTGGTTGTTGGAATCAACATTCCGAAGAGGACAACCAAATGCGGTTGAAGGAATGGAGACCATTTCAAAGGAAAGAGAAGTTTGCTGTATTTGCTGTCGGAAACTTGGGGTGTGCTATAAGTGTAATTATGGCCACTGTCAGAGCACATTTCATCCTTCTTGTGCTAGAAACGCTGGCTTCTACATGCATGTGAAGACTGGTGGAGGCAAGTTTCAGCACAAGGCTTACTGTGAAAAGCATAGCCTGGATCAGAGAGAGAAGGCTGAGACTCAGCAACATGGAGCCGAGGAGCTAAAAAGCATTAAACAAATTAGGGTTGAGCTTGAGAGGGTGCGCCTTCTATGTGATAGAATCATCAAACGAGAAAAGGTGAAGCGGGAGTTGGTTCTGTGTTCACACGATATACTTGCTTCAAAAAGAGACTCTGTTGCTTTCTCAGTGCTTGTTCGTAGTTCCTTCTTTCCGCCTGATGTTAGTTCAGAATCAGCCACTACCACTCTTAAAGGGCATGTGGATGATAATAAATCCGGCAGTGAAGCAATCCAAAGATCCGATGACATCACTGTAGACAGCGCCGTTTCTGGTAAGTGCCGAGTTATGCTTCCTGTGCCAATGGATGTTGACCAAAAGACTGATGACAGCTCCACATCCCAACGCCCCTGCACAAGAATAACTGACAGGGCGCCGTTTTCTGGGAAGCAAATACCTCATAGACCTGCATCTGTTGCCTCGCGGAACCTCACAGACGACGGGGAAAGGAGGTCAAAGTCAAGAAAGCACACTGAGACCTTTCAAAAAGAGCTTGTGATGACATCAGACCAAGCATCTGTCCAGAATCAGCGGTTACCAAAAGGATTTGCTTATGTTCCTGTCGTGTGCCTTCCAAAGGAAAAGCCAGTTTCTCGTGACAAAGGGTCTCACGAACCGGTAGAACCTGATGGATAG 4488 0.4563 MTGSRCHRRKMMGRGAEGGCGTEEKPCPISRVPNKQAVSRQDVDIDFYFQARKALCERSPFDSDDVVASRVSTLPVGLADFLSKYYQSRKRHKRSHSESGGHAPVAQPHSSNIWADTEDYFRPLTLFDIENLVAQSSFSCLATQSCFSIPSVRRVVLENVVSAANVAVEVGLDSAVVVEEVVKKEKEKEEEGEEEEEHYMEIDGGGADDLPSKETEQLSMPSSPSSSSDLQWLLGARNKILLTSERPSKKRKLLGSDAGLERLRIVEPSEGQDSPVCHLCCLGDTSEQSNQFLVCDSCNVVVHQKCYGVQDVPVRLWLCSWCKQRDCPKTGSDGNDLLLRPCLLCPKPGGALKPVAKDAAESKNGGLVKFAHLFCSQWMPEVYVEDTRTMEPIMNVEGIKETRRKLVCYLCKVKYGACVRCSHGTCRTSFHPICAREAKHRMEIWGKIGCDNVELRAFCSKHSEFQDINSTQQFKNHLSAAIGCDSPVSKHSPATLLVNKPQKLKLGPKNGDKSKVHVKTDGNSGRLGNNEIPLEHNMLPTRPNTRLRSECGDAQLCGSMETPERSNNGDINSSDSLDFVQALKKLIDRGKAILSDVALEIGISSDLLAATLAGDHPSFFPDLRCKITKWLRSRAYIGTYQQNWKIGSNSAVSSRARVAGPDDLNYFAIAGLGNSDAVPVKSVPPRRRTKSNIRILKDNKAVCSSKETFVQQNDSGIVIDEVNENPLVLNGDLKEDVTGNGSLFSDVDLRFKDKDVIEKILAEPSGNQDLGSSVGQSAGPEAKLADCCTSENGQAEETEISVRNTLLNSNEEHPVSSVDAVTPVAPDLIGGESASSSYIHPFIRNRLMQMQSSTFFKQENTPECFGPREKGMASVQTPCPASVCCNHQDRHPTCTDTNCTSEAVKLEQLVKARKMGILELSPEDEVEAELIYFQNRLLDQAVACKRYCDKIIFRIVKSLPQELDAARNQRWDSLLVNQYLCGLREAKKQGRKEKRHKEAQAVLAAATAAAAASSRISSFRKDAHDEAHHESLLRVNAVSGRTGPYSQMMPRAKETLSRLAVAKVSSEKHSDITPLTSGFSKEHPQSCDICRRSETIFNPIVVCCNCKVAVHLGCYRSVKDPTGPWYCELCEELLPCTSPRAPLVNSREKHCFVAQCGLCGATTGAFRKSTDGQWVHAFCAEWLLESTFRRGQPNAVEGMETISKEREVCCICCRKLGVCYKCNYGHCQSTFHPSCARNAGFYMHVKTGGGKFQHKAYCEKHSLDQREKAETQQHGAEELKSIKQIRVELERVRLLCDRIIKREKVKRELVLCSHDILASKRDSVAFSVLVRSSFFPPDVSSESATTTLKGHVDDNKSGSEAIQRSDDITVDSAVSGKCRVMLPVPMDVDQKTDDSSTSQRPCTRITDRAPFSGKQIPHRPASVASRNLTDDGERRSKSRKHTETFQKELVMTSDQASVQNQRLPKGFAYVPVVCLPKEKPVSRDKGSHEPVEPDG* 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 1340 1366 - -
Eupl13g01219 1495 PANTHER PHD FINGER PROTEINS 94 1028 - -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 1390 1405 - -
Eupl13g01219 1495 ProSiteProfiles Zinc finger PHD-type profile. 1084 1133 IPR019787 -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 503 543 - -
Eupl13g01219 1495 ProSiteProfiles Extended PHD (ePHD) domain profile. 1153 1262 IPR034732 -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 1384 1445 - -
Eupl13g01219 1495 SUPERFAMILY FYVE/PHD zinc finger 1082 1135 IPR011011 -
Eupl13g01219 1495 ProSitePatterns Zinc finger PHD-type signature. 1087 1130 IPR019786 -
Eupl13g01219 1495 CDD ePHD 1156 1261 - -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 1 24 - -
Eupl13g01219 1495 ProSiteProfiles Extended PHD (ePHD) domain profile. 339 463 IPR034732 -
Eupl13g01219 1495 ProSiteProfiles Zinc finger PHD-type profile. 274 325 IPR019787 -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 506 520 - -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 1428 1445 - -
Eupl13g01219 1495 SUPERFAMILY FYVE/PHD zinc finger 266 325 IPR011011 -
Eupl13g01219 1495 SMART PHD_3 1209 1262 IPR001965 -
Eupl13g01219 1495 SMART PHD_3 407 463 IPR001965 -
Eupl13g01219 1495 SMART PHD_3 276 323 IPR001965 -
Eupl13g01219 1495 SMART PHD_3 1086 1131 IPR001965 -
Eupl13g01219 1495 Pfam PHD-finger 1098 1131 - -
Eupl13g01219 1495 Pfam PHD-finger 290 323 - -
Eupl13g01219 1495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1152 1264 IPR013083 -
Eupl13g01219 1495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 339 465 IPR013083 -
Eupl13g01219 1495 ProSitePatterns Zinc finger PHD-type signature. 277 322 IPR019786 -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 183 229 - -
Eupl13g01219 1495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 332 IPR013083 -
Eupl13g01219 1495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1062 1134 IPR013083 -
Eupl13g01219 1495 MobiDBLite consensus disorder prediction 215 229 - -
Eupl13g01219 1495 Pfam PHD-zinc-finger like domain 1155 1261 - -
Eupl13g01219 1495 Pfam PHD-zinc-finger like domain 341 462 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01219 270 435 C2H2 Transcription Factor Family AT3G14740 34.320 7.74e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01219 - - nnu:104588727 1801.56