Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01209 ATGGCATTACAGAACATAGGTGCTGGAAACAGTGATGATGCCTTTTACAGGTATAAGATGCCAAAAATGATAACTAAGACTGAAGGTCGGGGAAATGGCATCAAGACAAACGTCGTCAACATGGTGGATATTGCAAAGGCCTTGGCCAGGCCTGCTTCTTACACCACGAAGTATTTTGGTTGCGAACTTGGAGCTCAATCCAAATTTGATGAGAAGACTGGAGTTTCTCTTGTAAATGGGAACCATACCACGTCTACGCTTGCTGGGCTCCTTGAGAATTTTATCAAGAAATATGTGCAGTGCTATGGATGTGGGAATCCCGAGACTCAGATTCTCATTAGTAAAACCCAGATGATCCAGCTAAAATGTGCGGCCTGTGGTTTTGTCTCTGATGTGGACATGAGGGACAAGCTCACGACGTTCATACTCAAGAATCCACCTGAACAGAAGGGATCAAAGGACAAGAAGGCAATGAGGAGGGCCGAGAAGGAACGACTGAAGGAAGGGGAGGCTGCTGATGAGGAGCAGAAGAAGCTGAAGAAGGTGGTGAAGAAGAAGAGCTCCAGTACTTCCAAGGATGTGGCCACAAAGGCTGGTGCCCCCACAAAGAAGAAGGCCGTGTCTGATGAGGATCACTCACCTGCTGGCAGTCAGGCCGATGAGAATGAAGCGGCTGATGATGATAATGAAGACATTGAGTGGCAGACGGATACCTCTTTAGAGGCAGCTCGACAGCGTATCCAAGAACAGTTGAGTGCTGTGACAGCTGAAATGGTTATGCTTTCCACTAATGAGCTGGACAAGGAAAAGCCAGAGTCAACGAAGAAAGCAGGCACTACTACTACTACTACTACCACCAAGAATGGTACTCCAGAACCCGAAAAGAAATCTGAACCAAAGGGAGGCGAGAATGGAACCACCATGATTAGCACACAGGAAAGACTAGTTGAGGAGATGAAAGGGAATCTAAAGAAAGGATTCACTGTGAGCCAGGTGCAGTCCATTTTGGCGTCACTGGATGGTTCGCCACAGGAGGTGATGATTGCACTGTTCGAGTCCCTCTTTGAGGGTGTTGAGAAAGGATTTTCCAAGGAGGTGACCAAGAAGAAGAACTACCTTGCTGCTGCCACTCGGGATGAGGGATCACAGATTCTTCTGCTGCGGGCAATAGAGGTCTTCTGCAAGAAATCTAACCCCGAGGCAGTGAAAGAGGTAGCCCTGGTTTTGAAAGCACTCTACGACACTGACGTGTTAGAAGAAGAGTACATAGTACAGTGGTATCAAGAAGGCCTGGCTGGAGGCAACAAGAGCTCTCAGATTTGGAAGAACGTCAAGCCTTTCATTGAGTGGATCCAGAATGCAGAGTCTGAATCAGAATAG 1380 0.4754 MALQNIGAGNSDDAFYRYKMPKMITKTEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGVSLVNGNHTTSTLAGLLENFIKKYVQCYGCGNPETQILISKTQMIQLKCAACGFVSDVDMRDKLTTFILKNPPEQKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKVVKKKSSSTSKDVATKAGAPTKKKAVSDEDHSPAGSQADENEAADDDNEDIEWQTDTSLEAARQRIQEQLSAVTAEMVMLSTNELDKEKPESTKKAGTTTTTTTTKNGTPEPEKKSEPKGGENGTTMISTQERLVEEMKGNLKKGFTVSQVQSILASLDGSPQEVMIALFESLFEGVEKGFSKEVTKKKNYLAAATRDEGSQILLLRAIEVFCKKSNPEAVKEVALVLKALYDTDVLEEEYIVQWYQEGLAGGNKSSQIWKNVKPFIEWIQNAESESE* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01209 459 CDD W2_eIF5 313 459 - -
Eupl13g01209 459 Coils Coil 158 178 - -
Eupl13g01209 459 ProSiteProfiles W2 domain profile. 302 459 IPR003307 GO:0005515
Eupl13g01209 459 MobiDBLite consensus disorder prediction 143 231 - -
Eupl13g01209 459 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Eupl13g01209 459 MobiDBLite consensus disorder prediction 148 191 - -
Eupl13g01209 459 Pfam eIF4-gamma/eIF5/eIF2-epsilon 383 459 IPR003307 GO:0005515
Eupl13g01209 459 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Eupl13g01209 459 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Eupl13g01209 459 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Eupl13g01209 459 SUPERFAMILY ARM repeat 312 455 IPR016024 -
Eupl13g01209 459 Gene3D - 105 145 - -
Eupl13g01209 459 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Eupl13g01209 459 Gene3D - 305 452 - -
Eupl13g01209 459 SMART 542_3 370 457 IPR003307 GO:0005515
Eupl13g01209 459 MobiDBLite consensus disorder prediction 276 290 - -
Eupl13g01209 459 MobiDBLite consensus disorder prediction 263 306 - -
Eupl13g01209 459 Gene3D - 3 104 - -
Eupl13g01209 459 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 458 IPR045196 GO:0003743|GO:0006413
Eupl13g01209 459 MobiDBLite consensus disorder prediction 203 217 - -
Eupl13g01209 459 FunFam Eukaryotic translation initiation factor 5 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01209 Eupl-Chr13 21696669 21698509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01209 1 454 Eukaryotic Initiation Factors Gene Family AT1G77840 62.121 0.0 536