Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01199 ATGGAGACGATGGTACCTGCTCCGTACAACGCTAACTCTAGTTCCCACCAGATGAAGGGAGGTTGCAAGAAGAAGAATCAGCACGGGGACGATGAGGAGGCTGTATCTCTCAATCTTCGTAAACTGTCGAAGCTCATCCTTCCTCCTTTGGGTGTCTCGACTTACAATCAGAACCAAATCGAGTCGAAAGGGAGAATTATCACACCGATGGATTCGCGATACAGGTGTTGGGAGACGTTGATGGCTGTTTTGGTAGCATACTCTGCATGGGTTTACCTTTTCGAGATTGCGTTCATGAACGCATCTCCCGTTAAAGGACTCTACATTTCAGACAACATCGTCGACCTGTTCTTCGCAATCGACATCATTCTAACATTTTTTGTGGCTTACATTGATCCAATAACTCAGCTTCTAGTTCGTGACTCCAGAAAAATTGCCCTCAGGTATCTGTCAACCTGGTTTATCATGGATTTGGCTTCCACAATCCCATCTGAGGCTCTAGCATACTTGTTTACAGGAAAACACAAAGTGGGTCTCTCTTACTGTCTATTGGGAATGTTAAGATTTTGGCGTCTAAGAAAGATTAAGCAAGTTTTCACAAGGCTTGAAAAGGACATTAGGTTCAGCTATTTCTGGATAAGATGCACTAGACTTCTATGTGTTACATTGTTTCTAGTGCATTGTGCTGGGTGCCTCTATTACTTGCTGGCTGATCTATACCCGCAACAAGGTAAGACATGGATTGGGTCGGCGAACCCGAATTTTAGAGAATCAAGCCTTTGGATTCGATATGTTTCCGCCATTTACTGGTCCACTACTACCATGAGCACTGTTGGCTATGGAGACTTGCATGCTGTGAACAGTAGGGAGATGATTTTCAACATATTCTACATGCTTTTTAATCTCGGCCTCACTGCCTACCTGATTGGAAACATGACCAATTTAGTCGTTGAAGGAACACGTCGAACCATGGAATTTAGGAATAGCATAGAAGCAGCTTCTAACTTCGTTTGTCGAAATCACCTACCTCCACGCTTGAAAGAGCAGATACTGGCATATATGTGTCTACGATTTAGAGCGGAGAGCTTGAATCAGCAACAATTGATGGAACAAATGCCCAAAACAATCTATAAAAGTATCTACCAGCATCTATTCCTACCAACTGTGAAAAATGTTTATCTCTTTGAAAGAGTCTCAAGTGAAATACTCTTGCTCCTGGTTGCTAAGATGAAGGCCGAATACATCCCACCTAGAGAGGATATTATAATGCAAAATGAAGCACCGGACGATGTTTATATCATTGTATCAGGCGAGGTAGAGATAATCGACTCCAAGATGGAGAATGAACGAATTGTCGGAATGCTATCGGCTGGAAGCATATTTGGTGAAGTCGGTGCACTTTGTTGTAGGCCTCAAAGTTTTACGTTTCGAACGAAGACGTTGTCTCAACTATTGAGGTTGAAGACAAGTGATCTGATAGAAGCAATGCGGACGAAAAACGAAGACAACTTAGTCATCCTCAGAAACTTTCTTGAGCACTACATAAAGCTTAAGGACCTCAGTAATGCAGATTTACTAGTTGAGAATGGAGAAGGTGACCACCCCAATCTAGCTTTCCTCCTGTTAACTGTGGCCAGTACTGGTAATGCTGCATTTCTAGATGAACTTCTGAAGGCTAGGTTGGATCCTGATATAAGGGACTCCAAAGGAAGAACTCCACTGCACATAGCAGCATCAAAAGGGCATGAAGATTGTGTTTCAGTCCTCCTCAGGCATGCATGCAACATCAATATACAAGACATAAACGGGAACACTCCTTTATGGGACGCCATCGCAGCAAAGCACTATTCCATCTTTAGGACCCTACACTACTGCGCGTCCATTTCTGATCCCTACACCGCCGGTGATCTTCTTTGCCTTGCAGCAAAAAGAAACGATATCTCAACGATCAAGGATCTCCTAGAACAAGGATTGATCGTTGACTCCAAAAATCGCCAGCATTTCACAGCTCTCCAAATTTCTATGGATGAAAACCACCGTGAGATGGCAGAATTCCTAGTAATGAACGGTGCCAACGTTAAAAAGGTAAAAAAAACTCCGTTCTGTTCAGTATATTTGGATGAAATGGTGCAAAAGAGAGAGGCGGGTCACCGGATTACAGTGCTCCAAGCAATACCAGTTGAAACTCATGGAGCGTTTTCTATGAGGGTGAGCATATACAGAGGCCATCCTGTGGTGAGGAGAAACACTTGTTGCATGGAAACTGGGAGGCTCATCAGTTTGCCAAATTCCATTGAAGAGCTTAAGACCATTGCAGGTGAGAAGCTTGGATTCGACGCGAGGAATACGATTATAACGAATGAAGAAGGCGCAGAAATTGACTCCATTGAAGTGATTAGAGATAATGATAAGATTTTCATAGTTGAAGATGCAAATATTCCTATTTAG 2448 0.4301 METMVPAPYNANSSSHQMKGGCKKKNQHGDDEEAVSLNLRKLSKLILPPLGVSTYNQNQIESKGRIITPMDSRYRCWETLMAVLVAYSAWVYLFEIAFMNASPVKGLYISDNIVDLFFAIDIILTFFVAYIDPITQLLVRDSRKIALRYLSTWFIMDLASTIPSEALAYLFTGKHKVGLSYCLLGMLRFWRLRKIKQVFTRLEKDIRFSYFWIRCTRLLCVTLFLVHCAGCLYYLLADLYPQQGKTWIGSANPNFRESSLWIRYVSAIYWSTTTMSTVGYGDLHAVNSREMIFNIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNHLPPRLKEQILAYMCLRFRAESLNQQQLMEQMPKTIYKSIYQHLFLPTVKNVYLFERVSSEILLLLVAKMKAEYIPPREDIIMQNEAPDDVYIIVSGEVEIIDSKMENERIVGMLSAGSIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSDLIEAMRTKNEDNLVILRNFLEHYIKLKDLSNADLLVENGEGDHPNLAFLLLTVASTGNAAFLDELLKARLDPDIRDSKGRTPLHIAASKGHEDCVSVLLRHACNINIQDINGNTPLWDAIAAKHYSIFRTLHYCASISDPYTAGDLLCLAAKRNDISTIKDLLEQGLIVDSKNRQHFTALQISMDENHREMAEFLVMNGANVKKVKKTPFCSVYLDEMVQKREAGHRITVLQAIPVETHGAFSMRVSIYRGHPVVRRNTCCMETGRLISLPNSIEELKTIAGEKLGFDARNTIITNEEGAEIDSIEVIRDNDKIFIVEDANIPI* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01199 815 FunFam Potassium channel KAT2 382 518 - -
Eupl13g01199 815 MobiDBLite consensus disorder prediction 1 20 - -
Eupl13g01199 815 Pfam Ankyrin repeats (3 copies) 545 625 IPR002110 GO:0005515
Eupl13g01199 815 PANTHER POTASSIUM CHANNEL AKT1 39 810 IPR045319 GO:0005249|GO:0006813
Eupl13g01199 815 SMART ANK_2a 569 598 IPR002110 GO:0005515
Eupl13g01199 815 SMART ANK_2a 633 662 IPR002110 GO:0005515
Eupl13g01199 815 SMART ANK_2a 602 630 IPR002110 GO:0005515
Eupl13g01199 815 SMART ANK_2a 666 695 IPR002110 GO:0005515
Eupl13g01199 815 MobiDBLite consensus disorder prediction 1 28 - -
Eupl13g01199 815 Gene3D - 538 706 IPR036770 -
Eupl13g01199 815 SMART cnmp_10 394 511 IPR000595 -
Eupl13g01199 815 PRINTS Ankyrin repeat signature 570 585 IPR002110 GO:0005515
Eupl13g01199 815 PRINTS Ankyrin repeat signature 682 696 IPR002110 GO:0005515
Eupl13g01199 815 ProSiteProfiles Ankyrin repeat profile. 569 601 IPR002110 GO:0005515
Eupl13g01199 815 Pfam Cyclic nucleotide-binding domain 414 498 IPR000595 -
Eupl13g01199 815 ProSiteProfiles cAMP/cGMP binding motif profile. 394 513 IPR000595 -
Eupl13g01199 815 Gene3D Jelly Rolls 362 525 IPR014710 -
Eupl13g01199 815 SUPERFAMILY cAMP-binding domain-like 321 512 IPR018490 -
Eupl13g01199 815 FunFam Potassium channel KAT3 76 318 - -
Eupl13g01199 815 Gene3D - 75 317 - -
Eupl13g01199 815 ProSiteProfiles KHA domain profile. 736 815 IPR021789 -
Eupl13g01199 815 SUPERFAMILY Voltage-gated potassium channels 69 317 - -
Eupl13g01199 815 Pfam KHA, dimerisation domain of potassium ion channel 736 807 IPR021789 -
Eupl13g01199 815 CDD CAP_ED 394 498 IPR000595 -
Eupl13g01199 815 ProSiteProfiles Ankyrin repeat region circular profile. 569 600 - -
Eupl13g01199 815 SUPERFAMILY Ankyrin repeat 509 697 IPR036770 -
Eupl13g01199 815 PRINTS EAG/ELK/ERG potassium channel family signature 290 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01199 815 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01199 815 PRINTS EAG/ELK/ERG potassium channel family signature 264 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01199 815 PRINTS EAG/ELK/ERG potassium channel family signature 308 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01199 815 PRINTS EAG/ELK/ERG potassium channel family signature 122 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl13g01199 815 Pfam Ion transport protein 75 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01199 Eupl-Chr13 21461539 21476286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01199 16 574 Ion Channels AT4G22200 70.870 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01199 K21867 - vvi:100261806 1188.71