Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01187 ATGGCTAGCGTAGTCCCTGTGGCGTACCAAGGCAACACGTCGGCCGCAGTGCCGGACTGGTTAAACAAAGGTGACAACGCATGGCAGATGATAGCAGCCACGCTTGTCGGTCTTCAGAGTGTACCGGGTCTGGTTATTCTATACGGAAGCATCGTCAAGAAGAAATGGGCCGTAAATTCTGCTTTCATGGCTCTTTACGCCTTCGCTGCCGTCTTGATTTGCTGGGTCACTTGGGCTTACAAGATGTCCTTCGGTGACAAGCTTCTCCCCTTCTGGGGCAAGGCGGGTCCTTCCTTAGGCCAGAAGTTCCTCATGAGACAGGCCAGATTGCCGGAGACAACCCAGTATTTCAAAAACGGAGGCGTCGAGACCGCTGTCGCCGCACCGTTTTATCCGATGGCGTCAATGGTGTACTTTCAATTCGTCTTTGCCGCGATTACTTTGATTTTGATTGCTGGGTCGTTGTTGGGAAGGATGAACATAAAAGCGTGGATGGTTTTCGTGCCGCTTTGGCTCACCTTTTCCTACACCGTCGGTGCTTTTAGTCTCTGGGGTGGCGGTTTCTTGTTTCACTGGGGCGTCATGGACTATTCAGGCGGTTACGTCATCCATCTCTCTTCCGGGATCGCCGGCTTCACTGCAGCTTATTGGGTGGGTCCACGTTCGACTAAGGATCGAGAGAGGTTCCCACCAAACAATGTTTTGTTGATGTTGGCAGGTGCGGGACTCCTCTGGATGGGTTGGGCTGGTTTCAACGGTGGTGATCCTTACTCAGCTAACATTGATTCATCGATGGCCGTATTAAACACCAACATATGTGCCGCTACAAGTTTACTTGTGTGGACGTGCTTAGATGTCATCTTCTTCAAGAAGCCTTCGGTGATCGGAGCCGTTCAGGGCATGATCACGGGGCTTGTTTGCATTACCCCTGGTGCAGGTCTTGTTCAAGGATGGGCTGCAATTCTCATGGGAATTCTCTCAGGCAGCATTCCCTGGTTCACCATGATGATCATTCACAAGAGATGGACATTACTTCAGAAGGTTGACGATACGCTCGGCGTCTTTCACACCCATGCTGTCGCGGGATTCCTAGGAGGTACCCTCACTGGTCTCTTTGCCGAGCCCGAGCTGTGCGCACTCTTCTTGCCAGTCACCAACTCTAGGGGCGGTTTTTACGGAGGCTCCGGTGGAGTGCAGTTCCTCAAACAGATTGTAGGGGCCTGTTTCATCATAGGTTGGAACCTTGTCGTGACGTCGATCATCTGTCTAGTGATAAAATTGGTGATGCCACTTCGAATGTCCGAGGAGCAACTGTTGATCGGGGACGATGCGGTGCACGGAGAAGAAGCATATGCACTGTGGGGAGACGGCGAGAAGTACGATTCTTCGAAGCATGGATGGTATTCTGATGAAACCTTACACAATAAGGCCTCCAGTGGTGTTACTCAGGTAGTCTAG 1458 0.5165 MASVVPVAYQGNTSAAVPDWLNKGDNAWQMIAATLVGLQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVLICWVTWAYKMSFGDKLLPFWGKAGPSLGQKFLMRQARLPETTQYFKNGGVETAVAAPFYPMASMVYFQFVFAAITLILIAGSLLGRMNIKAWMVFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSTKDRERFPPNNVLLMLAGAGLLWMGWAGFNGGDPYSANIDSSMAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAILMGILSGSIPWFTMMIIHKRWTLLQKVDDTLGVFHTHAVAGFLGGTLTGLFAEPELCALFLPVTNSRGGFYGGSGGVQFLKQIVGACFIIGWNLVVTSIICLVIKLVMPLRMSEEQLLIGDDAVHGEEAYALWGDGEKYDSSKHGWYSDETLHNKASSGVTQVV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01187 485 PANTHER AMMONIUM TRANSPORTER MEP2 12 463 IPR001905 GO:0008519|GO:0016020|GO:0072488
Eupl13g01187 485 FunFam Ammonium transporter 8 454 - -
Eupl13g01187 485 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Eupl13g01187 485 Pfam Ammonium Transporter Family 27 451 IPR024041 GO:0008519|GO:0016020|GO:0072488
Eupl13g01187 485 SUPERFAMILY Ammonium transporter 20 433 - -
Eupl13g01187 485 Gene3D Ammonium transporter AmtB like domains 4 454 IPR029020 -
Eupl13g01187 485 NCBIfam ammonium transporter 25 451 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01187 Eupl-Chr13 21060293 21064843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01187 133 465 Inorganic Solute Cotransporters AT2G38290 74.474 1.88e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01187 K03320 - nnu:104596709 885.56