Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01186 ATGGTGATTCCCTGCATCTCACTCTCAATCTTCCTTCTGTACCCTCTTTTCTACACCGTTGCTTATGCAGACATCTCACTGGGCTCTACCCTCCAACCCTCCAATTCCATCACCAACTGGACATCTCCCAATAACACCTTCTCTCTAGGTTTCATCCCCGTCGGCTCCACAAACCCCCTTTCCTTCTACGCCGCCATCTCCTTCTCTGGTATCCCCGTCTGGAAAGCGGGCGGCGACGCCGGCGTTGTTGACTCCACCGGCAGCTTCCGCTTCCTCTCCGACGGCAATCTCCGCCTAATCAACGGCTCCGGTAGAGTCATCTGGGAATCCGGGACTGCCAACCGCGGCGTTACGACGGCCACACTCGACGATTCAGGTAATCTCTCCCTGAAAAATGGCTCAGTAACAATTTGGTCCACTTTCGATAACCCGACCGATACGATCTTACCGGACCAGAATTTCACTACGCAGAAGACTCTGCGATCTGGGCTTTACTCTTTTTCCCTGCTCCCGTCTGGTAATCTTACTCTTAGATGGAATAACACTGCAATTTACTCGAACCAAGGCCTGAATTCCTCGGTCAATGAGAACATAACGAACCCGAGTTTGGTTCTTCAATCGATCGGAATTATACAGCTCAGTGATCTTTTGCTTTCTATTCCTATTGTTCTGGTTTATAGCAGCGATTATGGAGAGGGTAGTGATGTTCTTAGGTTTGTTAGGCTTGATACTGATGGGAATTTGAGGATTTATAGCTCTGTTAGGGGTAGCGGCATCTCTATAGAGAGATGGGCAGCTGTTTCAGATCAGTGTCAGGTTTTTGGGTGGTGCGGTAACATGGGCATCTGTAGTTACAACGATTCTAAGCCAATTTGTGGTTGCCCATCTGAGAATTTTGAGTTTTTGGATCCGAACGACAGCAGAAAGGGGTGTAAGAGGAAGGTGGAGATTGAAGATTGTCCCAGTAGTGGGACCATGTTGCAATTGGACCATTCCCAGTTCCTGACTTACCAACCTGAGCTCGCTTCCCAGGTTTTCTTTGTAGGGATATCAGGGTGCAGGTTGAATTGCCTCGCGAGTGGGTCGTGTGTCGCATCTACCTCCCTAGCTGACGGAACGGGACTTTGTTACCTGAAAGTATCGGAATTTGTTAGCGGGTACCAGTCCCCCGCTCTCCCTAGTACTTCTTTTGTCAAGGTTTGCGGACCAGTACTCCCGAACCCACCTCCATCGACTCTGGGCTCGGCCCAGAGAAAAACATTGAAATTGCGTCCTTGGGTTGTTGCTGTGGTGATTTTGAGTACTTTGGTGGGCTTAGTCCTGTTGGAGGGTGGACTGTGGTTGTGGTGCTGTAGGAACAGCCCCAAATTTGGTGGACTGTCAGCACAGTATGCCCTTCTCGAGTATGCCTCTGGCGCTCCAGTTCAGTTCTCGTACAAGGAGCTCCAGCGTTCGACCAAGGGGTTTAAAGAGAAGCTTGGAGCTGGAGGTTTTGGGGCTGTCTACAGAGGCATTCTTGCCAATAGAACGGTGGCTGCAGTGAAGCAGCTTGAAGGGATTGAGCAAGGGGAAAAGCAGTTCAGGATGGAGGTTGCAACAATAAGTAGCACCCACCATTTGAATTTGGTGAGGTTGATTGGGTTTTGCTCTGAAGGTCGCCACAGGCTGCTGGTTTATGAGTTTATGAAAAATGGGTCCCTGGATAACTGCCTCTTTGTTGCAGAAGAGACATCAGGGAGATTGTTGGATTGGAATACTCGGTTCAACATAGCACTTGGTACTGCCAGGGGGATCACTTACCTGCACGAGGAGTGTCGAGATTGCATTGTCCACTGTGATATAAAGCCGGAGAACATACTGTTGGATGAGAGTTACAATGCCAAGGTCTCTGATTTTGGCCTTGCGAAGCTCGTCAACCAGAAAGACCATCGATACCGAACCTTGACAAGTGTTAGAGGGACTAGGGGATACTTGGCACCAGAGTGGCTCGCAAACCTTCCAATCACATCCAAGTCTGATGTCTACAGCTACGGAATGGTGTTGTTCGAGATAGTAAGTGGGAGAAGGAACTTCGAAGTCTCGGCGGAGACGGGCCGGAAGAAGTTTTCCATGTGGGCTTATGAAGAGTTTGAGAGGGGAAATATAGAGAGCATTGTTGACAAAAGGCTTGCTGAGTGTGAGGTAGACATGGAGCAAGTGATGAGAGCAATTCAGGTGAGCTTCTGGTGCATCCAGGAGCAGCCATCTCAGAGGCCGACAATGGGGAAAGTGGTACAGATGCTGGAAGGGATTACAGTAATCGAGAAGCCGCCAGTGCCAAAGGCCACGGCTGAAGGGTCTGTTAGTGGCACCAGCGTGAATGTTAGCAGTAGTGTTAGTGCTCTCTCCACGTTTGCAGCATCGGCCCCAGCACTATCATCATCCTCGTCTCTCCAAGCCTTGGGGGCTTTATCATCTGTCTCCGAAAGGAATATAGGTAGAACATCTGCAGCTTCAGCACCAGCACCATCATCATCCTCATCTCTTCAAGGCTTGGGAGTTTTATCATCTGTCTCTGGGAGGAACATCGATAGAATATCATCATCCCTTCCGAGATCAAAATGA 2604 0.4958 MVIPCISLSIFLLYPLFYTVAYADISLGSTLQPSNSITNWTSPNNTFSLGFIPVGSTNPLSFYAAISFSGIPVWKAGGDAGVVDSTGSFRFLSDGNLRLINGSGRVIWESGTANRGVTTATLDDSGNLSLKNGSVTIWSTFDNPTDTILPDQNFTTQKTLRSGLYSFSLLPSGNLTLRWNNTAIYSNQGLNSSVNENITNPSLVLQSIGIIQLSDLLLSIPIVLVYSSDYGEGSDVLRFVRLDTDGNLRIYSSVRGSGISIERWAAVSDQCQVFGWCGNMGICSYNDSKPICGCPSENFEFLDPNDSRKGCKRKVEIEDCPSSGTMLQLDHSQFLTYQPELASQVFFVGISGCRLNCLASGSCVASTSLADGTGLCYLKVSEFVSGYQSPALPSTSFVKVCGPVLPNPPPSTLGSAQRKTLKLRPWVVAVVILSTLVGLVLLEGGLWLWCCRNSPKFGGLSAQYALLEYASGAPVQFSYKELQRSTKGFKEKLGAGGFGAVYRGILANRTVAAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNCLFVAEETSGRLLDWNTRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDESYNAKVSDFGLAKLVNQKDHRYRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLFEIVSGRRNFEVSAETGRKKFSMWAYEEFERGNIESIVDKRLAECEVDMEQVMRAIQVSFWCIQEQPSQRPTMGKVVQMLEGITVIEKPPVPKATAEGSVSGTSVNVSSSVSALSTFAASAPALSSSSSLQALGALSSVSERNIGRTSAASAPAPSSSSSLQGLGVLSSVSGRNIDRISSSLPRSK* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01186 867 MobiDBLite consensus disorder prediction 825 846 - -
Eupl13g01186 867 Gene3D - 21 142 IPR036426 -
Eupl13g01186 867 Gene3D - 145 266 IPR036426 -
Eupl13g01186 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 144 266 - -
Eupl13g01186 867 SMART serkin_6 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01186 867 SMART blect_4 31 144 IPR001480 -
Eupl13g01186 867 SUPERFAMILY Protein kinase-like (PK-like) 470 763 IPR011009 -
Eupl13g01186 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Eupl13g01186 867 Gene3D Transferase(Phosphotransferase) domain 1 562 772 - -
Eupl13g01186 867 FunFam S-receptor-like serine/threonine-protein kinase 461 561 - -
Eupl13g01186 867 PIRSF SRK 1 814 IPR024171 GO:0004674
Eupl13g01186 867 Gene3D Phosphorylase Kinase; domain 1 461 561 - -
Eupl13g01186 867 PANTHER OS07G0415500 PROTEIN 5 773 - -
Eupl13g01186 867 Pfam Protein kinase domain 490 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01186 867 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01186 867 CDD STKc_IRAK 493 764 - -
Eupl13g01186 867 CDD B_lectin 42 144 IPR001480 -
Eupl13g01186 867 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Eupl13g01186 867 Pfam D-mannose binding lectin 73 160 IPR001480 -
Eupl13g01186 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 562 771 - -
Eupl13g01186 867 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Eupl13g01186 867 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 187 IPR036426 -
Eupl13g01186 867 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01186 Eupl-Chr13 21041830 21045051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01186 460 771 Receptor kinase-like Gene Family AT5G20050 43.077 1.84e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl13g01186 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01186 - - nnu:104601534 1248.42