Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01166 ATGAGCAGGTACGTACATGGCACCTCCCTCTTTTTCTTCTTCTTCTTCTTCATTCCTTTCGTCTTGTCCCAACTCTCTCCAAACCAGAACGAAACCATTACCAAAATCTCCATACTTGTCAACAACAACAGCAACACTGTTTGGAACACCAAAGACCCAAATCCCTGTTCATGGGAAGGAGTGACTTGCACCACCAACAATAAATCCATAACCCATCTCTCCCTCTCTGGTTTTGCCATTTCTAGCATTGAGATTCTTACGGATTTGTGTCAGATTGATTCATTAGAGTCCATTAATCTCTCCAACAATTCCTTGACTTCCATCCCTGATGGGTTCATCACAAATTGTGGACAGATTAATGGCTTAAAGATGTTGAATCTCAGTAACAACGAGTTGTCTGGTTCCTTGCCGAATTTTCGTGGTTTTGTTGGGTTGGAGTCCTTGGATTTGTCTATGAATTTTTTGGGTGGAAATATTAATTTGCAACTAGATGGGTTGGTTGGGATTAAAAGCTTGAATCTGAGTTTCAACCAGTTCAATGGACCTGTTCCTACCGGTCTTGGTAAATGCATGGTTTTGGAGGAATTTCAGCTTTCGAAGAACCATTTCGAAGGTCGAATCCCTGAAGAACTCATGAGTTGTGGAAATCTAACCCTGATTGATCTCACTTCGAATAATCTTAATGGGTCTGTTCCAATTACTATAGGAGAGCTCTCCAAGTTGGAAACTCTCCTTCTCTCTGCCAATCTTCTGATTGGAAGAATACCTGGGAGTCTTTCGAGGATTCAGACCCTGTCGCGGCTTGCTGCAAACCAAAATCGTTTCACAGGTATCGTCCCTCCTGGAATTTCAAGATATGTGAACAATTTGGACCTGAGTTACAATGGATTAAGCGGGCCGATCCCATTGGACCTTCTGTCGCCTTCGAATTTGCAGTCTGTCGATCTTTCGAACAATTCACTATCAGGGCCGATCCCCACGAACTTCTCGCCGAGTTTGTTTAGGTTGCGATTGGGAGCCAACTCGATCAATGGGACCATCCCCTTAGAAGTTGGAATGCTCTCAAAATTGACCTATCTTGAGCTTGATAACAATAAGTTAAGTGGGGAGATTCCCCTGGAGTTGGGGGACTGTGGGAATTTAGCTCTGTTAAATCTCGCAGAAAATGAGCTGACAGGTTCGTTGCCTAAAGAGTTGGGAAAGCTTACGAAGCTTCAAGTTATGAAGCTCCAATCCAACAGGCTAATTGGAGAAATTCCTGATCAGCTTTCCCAATTACAGAACTTGTTGACGCTGAATATCAGCCGAAATTTGCTTACTGGTTCAATCCCTTCTGCAATTATCAGCTTACCAAAGCTTACAAACTTAAACCTACAAGAAAACGGCCTCAATGGTTCAATACCTGATTCAATTAGTAGTTTGAAATTACTGTTAGAACTCCAGCTCGGACACAATCGTTTAAATGGGAAGATTCCAATAATGCCAATTAGCCTGCAGATTGCACTCAACCTCAGCAGTAACTTCTTTGATGGAGCTATCCCAGAGACACTCCGCAGTTTATCTGCATTAGAGGTTTTGGATCTCTCAAACAACAACTTTACGGGTAAGATCCCGGATTTTCTCACTACAATGGTAAGCCTCACGCAGTTGTTGCTTTCTAACAATCAGCTCTCAGGAACCATTCCAAAGTTCCCAAACTATATCTCCGTCAATACCTCTGGTAATGTGGATCTCATCAATAAAACTACCTCAAACCCTACCCCTACTCCACCAAGGAAGAGAGATTCAGCCACTGTGGCAGTTCTTGTTGCAGTTGCAAGTGCAGTTCTTGCTGTTGGGGTTGTTGGAGTGATTCTTGTTCTAGTTTCAAGACGGTTTTATCGAGTCAATGATGAGAACCTACACGCAGAAGAACAACTCCCTCTGCCTCAGGTTGTCAATGGCCGTCTGTTAACTGCAAATATCATTCACAGAAATGGCATCGATTTCACCAAAGCAATGGAAGTAGTTAGTAATCCAGCAAACATCATACTCAAGAGCAGGTTTTCAACCTATTACAAGGCTGTCATGCCCTGTGGAACGAGCTATTATGTAAAGAAGCTTAACTGGAGTGACAAGATATTCCAGCTGGGGAGCCATGAGAGGTTTGGACAAGAGCTAGAGGTCTTAGGGAGGCTGACCAACTCGAATGTCATGATCCCTCTGGCCTATGTTTTGACTCTTGATAGCGCTTATCTCTTCTACGAGTATGCCCAAAAGGGAACTCTCTTTGATGTTCTTCACGTAAGTTCGGGAAATGCTTTGGATTGGGCAAGTCGTTACAGTATAGCTGTTGGAGTAGCTCAGGGTCTGGCTTTTCTCCATGGGTGCACCACTGGTCCCGTTATCCTCCTAGACCTTTCGGCCAAAAGCATCCTACTGAAGTCAATCAAGGAGCCTCAGGTTGGGGATATTGAGCTTTGTAAGGTCATCGATCCTTCAAGGAGCACTGGGAGCCTTTCGACAATTGCTGGTTCTGTCGGATACATTCCTCCAGAGTACGCTTACACAATGAGAGTGACAATGCCTGGGAATGTCTACAGCTTTGGGGTCATCCTACTGGAATTGCTGACTGGAAAACCAGCCGTCAGCGAGGGGACTGAATTGGCCAAGTGGGTACTGAGTAATTCAATGAAGCGTGACACATGGGATCAGATCCTCGATTCTACTGTCAGTAAAACATCACTTGGGGTTCGAAGTCAGATGCAATCGGTCCTAAAGGTTGCTGTAGGTTGTGTTACTGTCTCACCAGAAGCAAGGCCGAAGATGAAGAGTGTGCTAAGGATGCTGCTTAATGCTAGATAA 2844 0.442 MSRYVHGTSLFFFFFFFIPFVLSQLSPNQNETITKISILVNNNSNTVWNTKDPNPCSWEGVTCTTNNKSITHLSLSGFAISSIEILTDLCQIDSLESINLSNNSLTSIPDGFITNCGQINGLKMLNLSNNELSGSLPNFRGFVGLESLDLSMNFLGGNINLQLDGLVGIKSLNLSFNQFNGPVPTGLGKCMVLEEFQLSKNHFEGRIPEELMSCGNLTLIDLTSNNLNGSVPITIGELSKLETLLLSANLLIGRIPGSLSRIQTLSRLAANQNRFTGIVPPGISRYVNNLDLSYNGLSGPIPLDLLSPSNLQSVDLSNNSLSGPIPTNFSPSLFRLRLGANSINGTIPLEVGMLSKLTYLELDNNKLSGEIPLELGDCGNLALLNLAENELTGSLPKELGKLTKLQVMKLQSNRLIGEIPDQLSQLQNLLTLNISRNLLTGSIPSAIISLPKLTNLNLQENGLNGSIPDSISSLKLLLELQLGHNRLNGKIPIMPISLQIALNLSSNFFDGAIPETLRSLSALEVLDLSNNNFTGKIPDFLTTMVSLTQLLLSNNQLSGTIPKFPNYISVNTSGNVDLINKTTSNPTPTPPRKRDSATVAVLVAVASAVLAVGVVGVILVLVSRRFYRVNDENLHAEEQLPLPQVVNGRLLTANIIHRNGIDFTKAMEVVSNPANIILKSRFSTYYKAVMPCGTSYYVKKLNWSDKIFQLGSHERFGQELEVLGRLTNSNVMIPLAYVLTLDSAYLFYEYAQKGTLFDVLHVSSGNALDWASRYSIAVGVAQGLAFLHGCTTGPVILLDLSAKSILLKSIKEPQVGDIELCKVIDPSRSTGSLSTIAGSVGYIPPEYAYTMRVTMPGNVYSFGVILLELLTGKPAVSEGTELAKWVLSNSMKRDTWDQILDSTVSKTSLGVRSQMQSVLKVAVGCVTVSPEARPKMKSVLRMLLNAR* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01166 947 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 751 947 - -
Eupl13g01166 947 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 325 - -
Eupl13g01166 947 Gene3D Ribonuclease Inhibitor 287 589 IPR032675 -
Eupl13g01166 947 SUPERFAMILY Protein kinase-like (PK-like) 677 943 IPR011009 -
Eupl13g01166 947 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 639 750 - -
Eupl13g01166 947 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Eupl13g01166 947 Pfam Leucine rich repeat N-terminal domain 48 63 IPR013210 -
Eupl13g01166 947 Pfam Leucine rich repeat 502 557 IPR001611 GO:0005515
Eupl13g01166 947 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Eupl13g01166 947 SUPERFAMILY RNI-like 255 575 - -
Eupl13g01166 947 Gene3D Ribonuclease Inhibitor 32 185 IPR032675 -
Eupl13g01166 947 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Eupl13g01166 947 SMART LRR_typ_2 238 262 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 354 378 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 166 190 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 119 141 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 92 115 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 520 544 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 450 474 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 402 426 IPR003591 -
Eupl13g01166 947 SMART LRR_typ_2 309 336 IPR003591 -
Eupl13g01166 947 Gene3D Transferase(Phosphotransferase) domain 1 752 947 - -
Eupl13g01166 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 27 186 - -
Eupl13g01166 947 Pfam Protein kinase domain 682 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01166 947 Pfam Leucine Rich Repeat 310 330 IPR001611 GO:0005515
Eupl13g01166 947 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 328 588 - -
Eupl13g01166 947 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 211 943 - -
Eupl13g01166 947 SUPERFAMILY L domain-like 47 329 - -
Eupl13g01166 947 Gene3D Phosphorylase Kinase; domain 1 663 750 - -
Eupl13g01166 947 ProSiteProfiles Protein kinase domain profile. 671 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01166 Eupl-Chr13 20329692 20333123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01166 116 947 Receptor kinase-like Gene Family AT2G41820 37.602 7.50e-156 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl13g01166 Pkinase 5.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01166 - - csin:114266019 1163.67