Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01160 ATGGCGATCAAGTTGGATATGTCCAAAGCCTATGATCACATTGAATGGCCTTTCTTATTACATACTCTTCGAGCCATGGGATTTAGCGCAACGTGGATCAATCTCATATCCAGATGTGTATCATCCCCTTCCTATTCGATCAAGCTTAATGGCTCCCCATGTGGTTTCTTTTATCCAGCCCGTGGCCTTAGGCAAGGTGATCCATTATCCCCATTTCTCTTCGTGATAAGCATGATGTGCTTTCTAAACTCTTGCAAGGAGCTAAGCTTCACAACAACATTCATGGCATTAAAATTGCTCTCGCCGGTACACTCTGGTGGTGGTGGAGGTGGTGGAGGTGGTGAGGGTCCTTTCGGTTTCAGTGGCACAACAACCTTCTCTGGTGCAGGGATGCTGGGAAAATCATTGGCTCCTCCTGTGCTGACTGTTGAAGCTGCAACATGGTGTTCCCTTTCTGCTTCAGATGTTGCAACAGCTGCACCAAATTTCTCACTCCTGAAACTAAAATTCTCACATGGGGTTACACCAAATTTTCAAACTAATGTGATCAGAGGAAGAGCTTGGTTCTCTGTTTGTGCATCTAAGAAGTGGGAGTTACATTCAACTGCGCAGACCCAGACTGTCGTTTTGGGTGATGAAGAGAGGAAGACGTGGGAAGCATGCAGACAAGCTCTGTCTGCATTCAAGTTCAGTGTCAAGGAGGAAGACGTAATACTGGGAAAAGCATTTGGTCAGCTCCATTCACCTTACTGGGGTGAAGAAAGAACAAAAGAAGTTCCAAAACTTGAACTTGTAAATGAAACACTGGATTATCTGAGGAGTTTAGGCCTTTCTGATGAGGATCTTTGCAAGTTACTGAAGAAATTCCCTGAGGTGCTTGGATGCTGTCTTGATGATGAGCTGAGGAACAACGTCCAGGTTCTGGAGAAGGAGTGGGGTATCAAAGGGAAATCTCTTCGAAACCTTCTTCTCCGCAATCCCAAAGTTCTGGGTTATAATGTAGACTGTAAAGGAGACTGTATGGCTAAATGTACTCGCTGCTGGGTTCGTTTTTAG 1056 0.4517 MAIKLDMSKAYDHIEWPFLLHTLRAMGFSATWINLISRCVSSPSYSIKLNGSPCGFFYPARGLRQGDPLSPFLFVISMMCFLNSCKELSFTTTFMALKLLSPVHSGGGGGGGGGEGPFGFSGTTTFSGAGMLGKSLAPPVLTVEAATWCSLSASDVATAAPNFSLLKLKFSHGVTPNFQTNVIRGRAWFSVCASKKWELHSTAQTQTVVLGDEERKTWEACRQALSAFKFSVKEEDVILGKAFGQLHSPYWGEERTKEVPKLELVNETLDYLRSLGLSDEDLCKLLKKFPEVLGCCLDDELRNNVQVLEKEWGIKGKSLRNLLLRNPKVLGYNVDCKGDCMAKCTRCWVRF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01160 351 Gene3D Transcription termination factor 3, mitochondrial 257 347 IPR038538 -
Eupl13g01160 351 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 1 86 - -
Eupl13g01160 351 FunFam uncharacterized protein LOC106769908 201 347 - -
Eupl13g01160 351 SUPERFAMILY DNA/RNA polymerases 2 89 IPR043502 -
Eupl13g01160 351 Pfam mTERF 269 332 IPR003690 GO:0003690|GO:0006355
Eupl13g01160 351 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 2 87 IPR000477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01160 Eupl-Chr13 20148456 20165190 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl13g01160 RVT_1 3.8e-19 CL0027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01160 - - ming:122076973 334.724