Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01157 GTAGAAGAACTCGGCGAAGTTGTCGATCGCATTTTCCGGTGGGTCTCTCAGATGGAAATGATGGAGTCATGTGTGCCACCAGGGTTTAGATTCCACCCAACTGAAGAAGAGCTGGTGGGTTACTACCTTAGGAGGAAGATCAACTCCCAGAAAATTGATTTAGATGTTATCATCGATGTTGATCTCTACAGAATAGAGCCATGGGACATCCAAGATAGGTGCAAGCTAGGTTATGAAGAGCAGACTGAGTGGTACTTCTTCAGTCACAAAGACAAGAAGTACCCGACCGGAACTCGTACTAATCGAGCCACTGCTGCCGGATTCTGGAAGGCAACAGGGAGAGACAAGGCCGTGCTATCCAAGCATAGAATTATAGGGATGAGGAAGACATTAGTGTTCTACAACGGTCGAGCACCCAATGGGAGGAAAACCGATTGGATCATGCATGAATATCGACTCCAAACATCCGAACATGGACCCCCTCAGGACGAAGGATGGGTCGTGTGTCGAGCATTCAAGAAGCCAAGTCCAAGTCACAGGCAAGGTTTGGAAGCTTGGAATCGTGCTTATTATGTCAGGGATCATGACCATGCCGGACTTCGAACACTTGCCGATATTTTAAGTCCAATGCAACCACCTGATCCTTATCAAGCTGCAAATTTTCATCAACAATCCTTTGGTTGTGAGCAGGAGCTTGGTTCCAAGTCTACTCATTTGGATAATCAACTCATTGAACTTCCACAGTTGGATAGCCCTTCTATATCCACAAGTCTACCAAGTAGAGAAGGTTTCGAACCGAGTGGTATAACAAATGAGAATTCCACCCACGAAAGGAATAATCACAGAGGGCAATTCACTGATTGGAAAGCATTGGACAAATTACTCGAGTCTCAATTGACTGACATGACATCAAGTTCCCACTCTAATTTGCCGTTAATCCCCCAAGATTACGATGTTAACGAAGGAAATTGTTTCCTTGACTGCTTTCCTAACTTCTAA 999 0.4505 VEELGEVVDRIFRWVSQMEMMESCVPPGFRFHPTEEELVGYYLRRKINSQKIDLDVIIDVDLYRIEPWDIQDRCKLGYEEQTEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLSKHRIIGMRKTLVFYNGRAPNGRKTDWIMHEYRLQTSEHGPPQDEGWVVCRAFKKPSPSHRQGLEAWNRAYYVRDHDHAGLRTLADILSPMQPPDPYQAANFHQQSFGCEQELGSKSTHLDNQLIELPQLDSPSISTSLPSREGFEPSGITNENSTHERNNHRGQFTDWKALDKLLESQLTDMTSSSHSNLPLIPQDYDVNEGNCFLDCFPNF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01157 332 MobiDBLite consensus disorder prediction 257 280 - -
Eupl13g01157 332 ProSiteProfiles NAC domain profile. 25 174 IPR003441 GO:0003677|GO:0006355
Eupl13g01157 332 MobiDBLite consensus disorder prediction 257 274 - -
Eupl13g01157 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 260 - -
Eupl13g01157 332 SUPERFAMILY NAC domain 16 174 IPR036093 GO:0003677|GO:0006355
Eupl13g01157 332 FunFam NAC domain-containing protein 34 178 - -
Eupl13g01157 332 Pfam No apical meristem (NAM) protein 26 153 IPR003441 GO:0003677|GO:0006355
Eupl13g01157 332 Gene3D NAC domain 34 177 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01157 Eupl-Chr13 19910761 19914411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01157 18 321 NAC Transcription Factor Family AT2G18060 51.652 3.95e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g01157 NAM 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01157 - - nnu:104596793 444.121