Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl13g01127 | ATGGCAAATTCCAAATCGTCGTCGAACTTTAGAAATTTGCCCTACACTGGAAAACAGTCGCTACTTCCTCCCAAAAGTCCCTTCCCAAGCATATCCCCATCGTATGCTGATTATGGCTCTAGTTCTGCAATAGGATCCAAAGGTTTTCAGAGGCCAAGAGAGGGACATAGGCACCACCAACGTACTTCTTCTGAGAGCTTCCTCATAGAGGAGCAACCTTCTTGGGTTGAGGAACTACTTTATGAGCCAGAGACACCTGTACGGAGAGGTCATCGGCGTTCATCAAGCGACTCTTTTGCATATTGTGATACAGCTAACGCTCCTAACATAGATAACATATTTCAGGAGGAATACAAGTTTAAAAATATAACCTCAGTAACTTCAAGGGGATCTCAAGACTTCGATCACTATAAAGATGTGCGGCATTCTTCTTTCTATCCAGAACCAAATTGTTTTGGAAGACAGCAGGATAGGGCATGGGAATCATCCTTGAATTCTGTGACCTATTCAAGTGGGCTTCCTTCTGCAAGTGGTAACATTATACTTCAAGGCTTGGGATCCTCATGTGCTCCACTGGAACCAGATGGCACCACAGCCACTGAAAAGCAAGATCAAGAGGAATCTGGTCCACATGATCTGAAAGGTTCTTCTGACAGAAGGGATTGCTCTCACACTAAGCCTTCTGCATCTGACACAGATCCAAAACGTGCCAAACAGCAATTTGCTCAGCGTTCGCGAGTGCGGAAACTTCAGTACATAGCTGAGCTGGAAAGAAATGTCCAAGCTTTACAGGCAGAAGGATCTGAAGTTTCAGCTGAGATCGAATTTCTAAACCAGCAGAATCTTATACTGAGCATGGAGAACAAAGCCCTGAACAAACGGTTGGACAGTTTAGCCCAGGAGAAAGTCATAAAGTACCTGGAGCAGGAGGTGTTGGAGAGAGAGATCGCAAGGCTTCGAGCCTTGTGTCAGCAACAGCAACAGCAACAGCAGCAACAGCAACAGCAACCTCCATATACCCATCGTCGTGCCAAAAGTAGGGACCTGGATTCTCAATTTGCCAACCTATCCTTAAAACATAGGGAGGCCAGTTCTGGCCCAGATCCAGTCAGTGGCTCACTACGCATTTGA | 1131 | 0.4589 | MANSKSSSNFRNLPYTGKQSLLPPKSPFPSISPSYADYGSSSAIGSKGFQRPREGHRHHQRTSSESFLIEEQPSWVEELLYEPETPVRRGHRRSSSDSFAYCDTANAPNIDNIFQEEYKFKNITSVTSRGSQDFDHYKDVRHSSFYPEPNCFGRQQDRAWESSLNSVTYSSGLPSASGNIILQGLGSSCAPLEPDGTTATEKQDQEESGPHDLKGSSDRRDCSHTKPSASDTDPKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAEIEFLNQQNLILSMENKALNKRLDSLAQEKVIKYLEQEVLEREIARLRALCQQQQQQQQQQQQQPPYTHRRAKSRDLDSQFANLSLKHREASSGPDPVSGSLRI* | 377 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 187 | 243 | - | - | |
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 33 | 47 | - | - | |
| Eupl13g01127 | 376 | Coils | Coil | 309 | 336 | - | - | |
| Eupl13g01127 | 376 | CDD | bZIP_plant_RF2 | 235 | 281 | IPR044759 | GO:0003700|GO:0006355 | |
| Eupl13g01127 | 376 | PANTHER | BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED | 9 | 358 | IPR044797 | - | |
| Eupl13g01127 | 376 | Gene3D | - | 236 | 288 | - | - | |
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 328 | 349 | - | - | |
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 357 | 376 | - | - | |
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 199 | 240 | - | - | |
| Eupl13g01127 | 376 | SUPERFAMILY | Leucine zipper domain | 242 | 284 | IPR046347 | GO:0003700|GO:0006355 | |
| Eupl13g01127 | 376 | Coils | Coil | 246 | 301 | - | - | |
| Eupl13g01127 | 376 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
| Eupl13g01127 | 376 | SMART | brlzneu | 231 | 290 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Eupl13g01127 | Eupl-Chr13 | 18552642 | 18562716 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Eupl13g01127 | 233 | 305 | bZIP Transcription Factor Family | AT3G58120 | 52.564 | 4.41e-18 | 82.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl13g01127 | - | - | nnu:104586211 | 531.561 |