Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01125 ATGGATTCCATGAAGGGACAAGGTGGCATCCAGATGCTGCTGACTGCAGAACAGGAGGCCCAGCAAATTACTGCCAGTGCCAGAAACTTGAAAATTACAAAGTTGAAGCAGGCTAAAGAAGAAGCTGGAAGGGAAGCAGACCGCTATCGTGCCCATTTGGAGGCTGAGTATCAAAGGAAGCTTTCCGAGACCAGTGGTAACTCTGGCTCAAATGTGAAACGGCTGGAAGAGGAAACTACGATAAAGATCCAGAACTTGAAGGATGCGACCTCAAGGGTTTCTCCAGATGTTGTTGGCATGCTAATGAAGTATGTTATGACTGTGAAAACTTGA 333 0.4655 MDSMKGQGGIQMLLTAEQEAQQITASARNLKITKLKQAKEEAGREADRYRAHLEAEYQRKLSETSGNSGSNVKRLEEETTIKIQNLKDATSRVSPDVVGMLMKYVMTVKT* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01125 110 FunFam V-type proton ATPase subunit G 3 110 - -
Eupl13g01125 110 NCBIfam V-type ATPase subunit G 6 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Eupl13g01125 110 Gene3D - 1 110 - -
Eupl13g01125 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Eupl13g01125 110 Coils Coil 32 52 - -
Eupl13g01125 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01125 Eupl-Chr13 18452393 18479313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01125 1 109 Primary Pumps ATPases(2) AT3G01390 59.633 4.65e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01125 K02152 - csin:114261470 158.303