Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01109 ATGGAAAAGTACGAGCTCGTGAGGGATATTGGATCTGGAAATTTTGGCGTAGCGAGGCTTATGCGGAATAAGGAAACCAAAGAGCTTGTCGCCATGAAATACATCGATCGAGGACATAAGATCGACGAAAATGTGGCGAGAGAGATCATAAACCACAGATCGCTTCGACACCCGAACATAATCCGATTCAAGGAGGTTGTTCTGACTCCTGCACATCTCGCCATCGTCATGGAGTACGCCGCAGGTGGAGAGCTGTTCGAGCGAATCTGCAACGCCGGAAGATTCAGTGAAGACGAGGCGAGATATTTCTTCCAGCAGCTTATCTCTGGCGTGAGCTACTGTCATTCCATGCAAATCTGCCACCGAGATTTGAAGCTGGAGAATACACTCTTGGATGGAAGCCCTGCACCACGTCTGAAAATCTGTGATTTCGGATACTCGAAGTCATCTCTGCTGCATTCAAGACCTAAATCAACGGTTGGAACTCCAGCATATATTGCGCCAGAGGTTCTTTCACGGCGAGAATATGATGGCAAGTTGGCAGATGTCTGGTCATGTGGAGTAACTCTCTATGTTATGCTGGTGGGAGCATACCCTTTTGAAGACCAACAGGACCCCAAGAATTTCAGGAAAACCATTGGACGCATAATGGCTGTTCAATACAAAATTCCCGACTATGTTCACATATCTCAAGATTGCAAGCATCTCCTTTCTCGCATATTTGTTGCAAATCCATCCAGGAGGATTGCCATCAAAGAAATCAAGAACCACCCATGGTTCTTGAAGAACTTGCCGAGGGAGCTAACAGAGTCAGCCCAAGCAGTGTACTATCAGAGAGACAACCCAAGCTTTTCCCTCCAGACAGTGGATGACATAATGAAAATTGTGGGGGAGGCAAGAACTCCTCCTCCAGCATCCAGGTCCATTGGGAGCTTCGGCTGGGCAGGGGAAGAAGATGATGAGGAAGGGAAGGAAGAAGATGGAGATGCAGAGGAGGAGGATGAAGACGAGTACGAAAAGAGGGTTAGGGAAGTGCATGCAAGTGGAGAGTTTCATGTCAGTTAA 1065 0.4761 MEKYELVRDIGSGNFGVARLMRNKETKELVAMKYIDRGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPAHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQQDPKNFRKTIGRIMAVQYKIPDYVHISQDCKHLLSRIFVANPSRRIAIKEIKNHPWFLKNLPRELTESAQAVYYQRDNPSFSLQTVDDIMKIVGEARTPPPASRSIGSFGWAGEEDDEEGKEEDGDAEEEDEDEYEKRVREVHASGEFHVS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01109 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Eupl13g01109 354 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Eupl13g01109 354 MobiDBLite consensus disorder prediction 339 354 - -
Eupl13g01109 354 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Eupl13g01109 354 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Eupl13g01109 354 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Eupl13g01109 354 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01109 354 MobiDBLite consensus disorder prediction 315 338 - -
Eupl13g01109 354 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01109 354 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Eupl13g01109 354 CDD STKc_SnRK2 3 259 - -
Eupl13g01109 354 PANTHER SERINE/THREONINE KINASE 2 298 - -
Eupl13g01109 354 MobiDBLite consensus disorder prediction 298 354 - -
Eupl13g01109 354 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01109 354 SUPERFAMILY Protein kinase-like (PK-like) 1 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01109 Eupl-Chr13 17929407 17939227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01109 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 42.857 1.53e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Eupl13g01109 Pkinase 6.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01109 K14498 - nnu:104586970 645.195