Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01101 ATGGGTCTCTTCTCCGTAGTCTCTCGCTCTCTTCTGCTCCGCAGCAGCACCAGCGGCAGTAAGCTCTCACTCTCAAAGCCTTCGATCATGATTTCGACATCGTGGAAGAGATGGATCTGCCATCATCACGATGGTGGCGTCGTTGATGAGAAAATCACCGGCGCAAGTGCTTATCACTTGAGCGGTGGACCTTCTTTCATGCGCGGCACCGTCTTTTGGGGCCAACCCAATACACCTCTCACCATCGAAGATTTCCACATGCCTCGCCCCAAAGCCGGCGAAATTCTCATCAAAACCAAAGCCTGTGGAGTCTGTCACTCTGATCTTCACGTCATGAAAGGTGAACTTCCATTTGCAAGTCCTTGTGTTGTTGGTCACGAAATAACCGGAGAGGTAGTCGAACATGGGGCCCACACCGATGCTGGAATTATAAAGAGGTGTCCTATTGGAGCTCATGTAGTAGGAGCATTTATAATGCCTTGCGGGAACTGTTTCTTCTGTGTGAAGGGTCAAGAAGATTTATGCGAGGATTTCTTTGCTTACAATCGGGCGAAAGGAACGCTCTACGATGGTGAAACCCGGTTGTTTCTCCGTAGCAATGGAAAGCCAGTGTACATGTATAGTATGGGAGGTCTTGCAGAGTATTGTGTTGTACCTGCTCATGCATTATCAGTTCTTCCAAACTCATTGCCATATACAGAGTCAGCTATTTTGGGATGTGCAGTCTTCACTGCCTATGGTGCCATGAGACATGCAGCTGAGATGCGTGCTGGAGATGCTGTCGCTGTGATTGGCATTGGTGGTGTTGGATCAAGTTGTTTGCAGATAGCACGGGCATTTGGTGCTTCTGAGATTATTGCAGTTGATGTTCAAGATGAAAAACTTCATAATGCAAAGATGCTAGGAGCAACTCACACCATAAATGCAGCAAAGGAGGATGCTGTTGATAAGATTAAGGAAATAACTGGAGGAATGGGTGTGGACATTGCTGTGGAAGCGTTGGGGAAACCGCAAACTTTTTTGCAGTGCACACAGAGTGTACGAGATGGGGGAAAAGCTGTAATGATTGGACTTGCGCCATCCAACGTGATAGGGGAGATAGATATAACCCGTCTTGTCCGTAGACAGATAAAGATCATCGGTTCATATGGAGCCAGGGCAAGGCAAGATCTTCCCAAGTTGGTTAAATTAGCAGAGACAGGTATCTTCAATCTCAGTGCTGCTGTTTCAAGAAAATGCAAATTCGAAGAGGCAGATAAAGCATACAAGGATCTTGATAGGGGAAGTATCGTCGGCCGAGCTGTTGTTGAGATCTACTGA 1320 0.4705 MGLFSVVSRSLLLRSSTSGSKLSLSKPSIMISTSWKRWICHHHDGGVVDEKITGASAYHLSGGPSFMRGTVFWGQPNTPLTIEDFHMPRPKAGEILIKTKACGVCHSDLHVMKGELPFASPCVVGHEITGEVVEHGAHTDAGIIKRCPIGAHVVGAFIMPCGNCFFCVKGQEDLCEDFFAYNRAKGTLYDGETRLFLRSNGKPVYMYSMGGLAEYCVVPAHALSVLPNSLPYTESAILGCAVFTAYGAMRHAAEMRAGDAVAVIGIGGVGSSCLQIARAFGASEIIAVDVQDEKLHNAKMLGATHTINAAKEDAVDKIKEITGGMGVDIAVEALGKPQTFLQCTQSVRDGGKAVMIGLAPSNVIGEIDITRLVRRQIKIIGSYGARARQDLPKLVKLAETGIFNLSAAVSRKCKFEEADKAYKDLDRGSIVGRAVVEIY* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01101 439 Gene3D - 75 428 - -
Eupl13g01101 439 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 66 436 - -
Eupl13g01101 439 FunFam Alcohol dehydrogenase (Zinc) 72 262 - -
Eupl13g01101 439 Pfam Alcohol dehydrogenase GroES-like domain 93 223 IPR013154 -
Eupl13g01101 439 SMART PKS_ER_names_mod 74 436 IPR020843 GO:0016491
Eupl13g01101 439 CDD Zn_ADH10 67 437 - -
Eupl13g01101 439 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 230 403 IPR036291 -
Eupl13g01101 439 Pfam Zinc-binding dehydrogenase 268 398 IPR013149 -
Eupl13g01101 439 Gene3D - 245 382 - -
Eupl13g01101 439 SUPERFAMILY GroES-like 64 271 IPR011032 -
Eupl13g01101 439 FunFam Sorbitol dehydrogenase 245 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01101 Eupl-Chr13 17680505 17722177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01101 85 438 Monolignol Biosynthesis Gene Families AT4G37990 25.683 1.68e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01101 - - msin:131242835 707.597