Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01091 ATGAAGACCCCAGCTCTTGAAACAGCGCCAAAAGAAGAAGGAGAAGAAGAAGAAGTACAAGTGGATAGAGAGAAGAAAACCAGTAGTGGTTTTAGAAATCATCTTGGACCCAAAACTAGAGAGACAGAACTAAGGCTTGGGTTCTCTCTAAATGGTTTTGATGATGATGACATGGGTGTAGTGAAACAGAGAAATGGTAGTTTTGGAGCCACCAAAAGATGGTTTTCTGAAACTGAAGATGGTTTTGGAAGTCAATGGAGTTTGGGTTCAAAGCAAGAAAAATCAATTTTCCAGCAAAACCACCAACAGCAACGCATCAACCCTTCTCCTACTGTTTCCAGAGCTCCTCCTGTGGTGGGTTGGCCACCGGTTCGCGCGTTCCGGAGGAACTTAGCCCTGACCCCGAAGCCAGAATTGGAGTCGAAAACTGGTACCAAATCTTCGGTAGAAGCCACGACAATGTCGGAAGACTCTATGTATGTAAAGGTCAACATGGAAGGTTACGCAGTTGGGAGGAAGATCAATCTTAAGGCCCATGACGGATATGAGTCCCTTTCCCAGGCACTTCAGAAGATGTTCGACAACTTCTTCTCAGTTAATTACTTAAAGAACCAAGAACAGGCTGAAGAAGAAATGGTTGCAACTCCGAAGCACGTTCTTATTTACGAAGACAATGAAGGAGATCGAATGCTCGTAGGCGACGTGCCATGGGAGATGTTCATCAACACAGTGAAAAGGCTATATATCATCAGTGGCTCTAGAGCACCAGCAATTGTAGCTGAAAGAGAGGGGAGAACTCAGCTGTGA 807 0.4498 MKTPALETAPKEEGEEEEVQVDREKKTSSGFRNHLGPKTRETELRLGFSLNGFDDDDMGVVKQRNGSFGATKRWFSETEDGFGSQWSLGSKQEKSIFQQNHQQQRINPSPTVSRAPPVVGWPPVRAFRRNLALTPKPELESKTGTKSSVEATTMSEDSMYVKVNMEGYAVGRKINLKAHDGYESLSQALQKMFDNFFSVNYLKNQEQAEEEMVATPKHVLIYEDNEGDRMLVGDVPWEMFINTVKRLYIISGSRAPAIVAEREGRTQL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01091 268 ProSiteProfiles PB1 domain profile. 158 252 IPR000270 GO:0005515
Eupl13g01091 268 Pfam AUX/IAA family 47 256 IPR033389 -
Eupl13g01091 268 Gene3D - 153 263 - -
Eupl13g01091 268 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 41 255 IPR003311 GO:0005634|GO:0006355
Eupl13g01091 268 SUPERFAMILY CAD & PB1 domains 153 247 - -
Eupl13g01091 268 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01091 Eupl-Chr13 17401319 17405035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01091 140 251 B3 DNA Binding Superfamily AT4G23980 35.714 1.30e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Eupl13g01091 AUX_IAA 2.3e-52 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01091 K14484 - msin:131242822 332.413