Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01077 ATGGCAGCGGTGGGAGGTGAGGAGACGTCGTTGTTATCGCCGAGGAATCGGTTCAAGTTCTTGTGCAGCCATGGCGGTAAGATATTACCAAGGGCCCCCGACGGTCAGCTCAAATACATTGGAGGCGATACCCGTGTCATCGCCGTTCATCGCGATATCACCTTCTCAGGTCTAATGAAGAAGCTTAATAGCCTGTTCGGTGATGATGTGGTCCTCAAGTACCAATTGATCCCTGAGGACTTAGATGCCTTGGTCTCCGTAACGTGCGACGAAGACCTCAACCATATGTTGGATGAGTACGATCAACATGATGCGAAATCGTCTGACAATGGTGGGACCCCGAGGCTGCGAGCCTTCTTGTTCCCGTCCAATCCGACGGTAATCGAGAATCAAGCAGCTCGTAACTCTACATACAACCATGCACTCGAGCAGCGCTACATCGACGCGATCAATGGAGTCTTACGTACCTCTAGTAACATAAGCCGTGCAACCTTCAGCACTTCATCCAACGGATCATCTCCAAATTCCATTCTCCCCACTGATGCCCCCACCGTTGAAACTATCAATCATGATGCATTTGTATCGAACTGCTATCAGAGGAATAGCCGTAACCAAGAGATCCTTAGGGTCCATAGTTCTCCCACCCTGTACAGCCTTGGTAACCAACACCAACACCACCACCACCACCACCACCACCACCACCCTACTCCCCAACTCCAGCAACAACACTACCAGTCCTCAAGACTACAAGGTCCGTACAGTGGTGGGAATCGACGGCTGATATCAACATTATCGATGGGCCAAAGTGATATTGGGAGATCCCCTACTGGATACGCTCGCAGAGGGAGTTGTGGATGCCTTAGCTGTGGACATGTAGAGGAAAGCAAGGTTTTCAGGTGTGTAGGGCATGAAATGGCAGACAGTCTTCCTTATAGTCCCAGGAAGCAAAGATGGGAGTAA 960 0.5052 MAAVGGEETSLLSPRNRFKFLCSHGGKILPRAPDGQLKYIGGDTRVIAVHRDITFSGLMKKLNSLFGDDVVLKYQLIPEDLDALVSVTCDEDLNHMLDEYDQHDAKSSDNGGTPRLRAFLFPSNPTVIENQAARNSTYNHALEQRYIDAINGVLRTSSNISRATFSTSSNGSSPNSILPTDAPTVETINHDAFVSNCYQRNSRNQEILRVHSSPTLYSLGNQHQHHHHHHHHHHPTPQLQQQHYQSSRLQGPYSGGNRRLISTLSMGQSDIGRSPTGYARRGSCGCLSCGHVEESKVFRCVGHEMADSLPYSPRKQRWE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01077 319 MobiDBLite consensus disorder prediction 222 237 - -
Eupl13g01077 319 SUPERFAMILY CAD & PB1 domains 34 127 - -
Eupl13g01077 319 PANTHER OS05G0427100 PROTEIN-RELATED 13 245 - -
Eupl13g01077 319 MobiDBLite consensus disorder prediction 238 258 - -
Eupl13g01077 319 CDD PB1_UP2 21 121 - -
Eupl13g01077 319 Gene3D - 38 120 - -
Eupl13g01077 319 SMART PB1_new 32 123 IPR000270 GO:0005515
Eupl13g01077 319 MobiDBLite consensus disorder prediction 217 258 - -
Eupl13g01077 319 Pfam PB1 domain 34 122 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01077 Eupl-Chr13 16961504 16965202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01077 17 176 MAP Kinase Kinase Kinase AT3G46920 39.506 1.22e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01077 - - mof:131164986 268.47