Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl13g01076 | ATGGCGTCTGCTAGTCTGGGACATGGCGGTGTAGGCAGTTCCCGGACAACTAATAGCTTTAAGGGCTCATCTAGCTCAGTTGACTGGCTTGGTAGAGAGATGCTTGAAATGAGTTTAAGGGACAACAAGCCGGACCAGGATGATGATAAATTGCAGGATAGTGAACCAGATGTAATTGATGGCATGGGTGCCGAGGCAGGACATATAATAGCAACTACTACTGGTGGTCGAAATGGCCAACCCAGGCAGACAATCAGTTACATAGCAGAACATGTGGTTGGAACTGGTTCTTTTGGTGTTGTTTTCCAGGCCAAATGTAGAGAGACTGGAGAAATTGTTGCTATCAAGAAGGTTCTGCAAGACAAGCGCTACAAGAATCGGGAGTTACAGATTATGCAAATGTTGGATCATCCTAACATTGTTGCTCTTAAGCATTGCTTCTTTTCAACGACAGACAAGGAAGAGCTCTACCTAAATCTTGTACTTGAATTTGTCCCGGAGACTGTTAATCGTATTGCAAGGCAATACAATAGGATCAACCAGCGAATGCCCTTAATATATGTGAAACTCTATACCTATCAGATCTGCAGATCACTTGCTTACATACATAATTGCGTTGGTATTTGTCACCGTGATATTAAGCCACAAAACTTGCTAGTGAACCCTCATACACATCAGCTGAAACTTTGTGATTTTGGAAGTGCAAAAGTATTGGTAAAAGGAGAACCAAATATCTCTTACATTTGTTCAAGATATTATCGTGCCCCTGAGCTCATCTTTGGTGCAACTGAATACACAACAGCGATAGATATGTGGTCTACAGGTTGTGTGATGGCCGAATTACTCCTTGGGCAGCCACTGTTTCCTGGAGAAAGTGGAGTGGATCAACTAGTTGAGATCATCAAGGTTCTGGGGACACCTACAAGGGAGGAGATAAAGTGCATGAATCCAAATTACATTGAATTCAAGTTCCCACAGATAAAGGCTCATCCATGGCACAAGGTTTTCCAAAAACGTTTGCCCCCAGAAGCAGTTGACCTGGTCTGCAGATTCCTGCAGTACTCTCCTAATCTGCGGTGCACTGCTTTGGAAGCTTGCATTCACCCTTTCTTTGATGAATTGAGAGACCCAAACACTCGCCTTCCTAATGGTCGCCCACTTCCTCCACTCTTCAATTTCAAACCCCAAGAGCTCTCTGGCATCCCACCCCATAATATCGGCCGGCTTATTCCTGAGCATGCTAGAAAGCAGAACTTGTTCATGGCACTGCACACCTAG | 1278 | 0.4437 | MASASLGHGGVGSSRTTNSFKGSSSSVDWLGREMLEMSLRDNKPDQDDDKLQDSEPDVIDGMGAEAGHIIATTTGGRNGQPRQTISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEFVPETVNRIARQYNRINQRMPLIYVKLYTYQICRSLAYIHNCVGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYIEFKFPQIKAHPWHKVFQKRLPPEAVDLVCRFLQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPHNIGRLIPEHARKQNLFMALHT* | 426 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl13g01076 | 425 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 415 | - | - | |
Eupl13g01076 | 425 | FunFam | Glycogen synthase kinase-3 beta | 71 | 166 | - | - | |
Eupl13g01076 | 425 | Pfam | Protein kinase domain | 89 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl13g01076 | 425 | MobiDBLite | consensus disorder prediction | 9 | 25 | - | - | |
Eupl13g01076 | 425 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 54 | 417 | - | - | |
Eupl13g01076 | 425 | Gene3D | Phosphorylase Kinase; domain 1 | 71 | 166 | - | - | |
Eupl13g01076 | 425 | SMART | serkin_6 | 87 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl13g01076 | 425 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 208 | 220 | IPR008271 | GO:0004672|GO:0006468 | |
Eupl13g01076 | 425 | ProSitePatterns | Protein kinases ATP-binding region signature. | 93 | 117 | IPR017441 | GO:0005524 | |
Eupl13g01076 | 425 | ProSiteProfiles | Protein kinase domain profile. | 87 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Eupl13g01076 | 425 | CDD | STKc_GSK3 | 82 | 374 | IPR039192 | - | |
Eupl13g01076 | 425 | FunFam | Shaggy-related protein kinase kappa | 167 | 415 | - | - | |
Eupl13g01076 | 425 | SUPERFAMILY | Protein kinase-like (PK-like) | 86 | 398 | IPR011009 | - | |
Eupl13g01076 | 425 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl13g01076 | Eupl-Chr13 | 16918566 | 16942873 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl13g01076 | 93 | 379 | Core Cell Cycle Gene Families | AT1G76540 | 34.915 | 9.74e-56 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_GSK | Eupl13g01076 | Pkinase | 2.5e-64 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl13g01076 | K03083 | - | msin:131242804 | 827.009 |