Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01074 ATGGGCTGCATTTGCTCAAAAAGGGCGGCAGAAGATGACTATGTTGAAAACCAGAGAGAGAAGGGATCGAGCAAGTCTTCAAAACGATTGGTTGCTCCCTCAAGGAGGGAGGAAATTGTAGTGGAGGTTGATGCTAGTGGTAGTGGCGGGATCAATGGAACAGCGAGGTGGATATCGAAGCCACCAGCACAAGAGAAAGTGGTCTCCACTCCAATTTCATCAGATGAGGGAGGGAAGAGGCCATTGATTATTGAGCAGCCTGCATTAGCTGATCATCAGAGACAGGTATCATTGGATATTGAGGTGAATGGAAGACTGCCACTAGTTTCAAGGTTAGTTAGTATGCCCAATGGCATTGCGGGGGAACAGGTTGCTGCGGGGTGGCCACCTTGGCTCACAGCAGTGGCTGGAGAAGCAATCAAGGGGTGGTTGCCTAGAAGGGCTGATTCATTCGAGAAATTAAACAAAATTGGACAAGGAACTTATAGCAACGTTTACAGAGCCCGAGATCTTGAAACTGGCAAAATTGTCGCACTGAAGAAAGTGCGGTTCGTTAATATGGATCCAGAAAGCGTCCGTTTTATGGCGAGGGAAATCTACATTCTGCGTAGGCTTGATCACCCAAATGTTGTGAAGCTCGAGGGTCTGGTCACATCACGGATGTCCTGCAGCTTGTACCTTGTCTTCGAATATATGGAGCATGATCTTGCTGGGCTTGCAGCATCACCGGGTATCAAGTTTACTGAACCACAGATTAAATGTTATATGCAGCAGCTACTTCGTGGGCTTGAACACTGCCATAGTCGTGGGGTCCTGCATCGAGACATCAAGGGTTCGAATCTTCTGATAGACAATAATGGTATTCTCAGGATTGCTGACTTTGGGTTGGCGAACTTTTTCCATACTGATCAGAAGCAACCGCTGACGAGCCGTGTTGTAACTCTTTGGTATCGACCTCCTGAGCTTTTGCTCGGTGCTACGGAATATGGGGTTGCTGTGGATCTGTGGAGTACCGGTTGCATCCTTGCAGAATTGCTTGCTGGGAAGCCTATCATGCCAGGAAGAACAGAGGTGGAGCAACTTCATAAGATCTTTAAGCTCTGTGGTTCGCCTTCCGAGGAGTACTGGCAGAAAGCAAGATTGCGACATGCAACAATTTTCAAGCCTCAACATCCTTACAATCGTTGTGTATCTGAGACATTCAAGGAGTTCCCTTCTTCGGCTTTGTCCCTTATGGATGTTCTCCTTGCAATAGAACCTGAAGACCGTGGATCAGCTGCTTCTGCACTTAAAAGTGAGTTCTTTAAAACAAAGCCTCTTCCCTGTGATCCATCAAGTTTGCCCAAATATCCACCAAGCAAGGAGTTTGATGCTAAGCTTCGGGTTGAGGAAACCAAAAGGCAAAAAGCAGCAGCCATAAAAGGGCATGGATCGGAATCCAGAAGAAGGGGTTCAAGAGATTCCAAAGCAGTGCCAGCTCCAGGTGCCAACACTGAACTTCAGGAATCAATACAGAAGCGACAAGGACATTCAAACCCAAAAAGCAAGAGTGACAAATATAATCCACAAGAAGATGGTGGGACTGGCTTCCCCATCGAGCCTCCCAGAGGAGCCGCACGGAATGGTTTCTCTCATTCCGCTTCATTGATTCACCCCAGTGCATTTGGATCTTCATGGAATAAGAAGGTGAAGGAAGATGAGAGTCTGGCAAGGCCTAAGCAAGCACTTGGTACTTCAAATAATGGCCCAGAGTTGAGAACACAGAGATCACACATGCCTCAGGTAGCCGCCAACTTGTCCAACTTCTCTGGTTTGGTAGCAGCAAGAAGCAGTGCACGGTTGAATAACCATAGAGAGAGGAATAAAGGTTCCCACTGGCCGGAACAGCAACTGAATGCCAGATACAATCAGCTAGATGATGCCGAGCACTCTGAAAAGCAGGAGAGAACCCACCATTTGCTGGATAGGCCAGCCTCTCCTTACAAGAAGGGTGAGAAGATATCTGGCAAGGAATCCATGGTGGGTTATGGCCCCAAGAAGAACAGGATCCACTACTCTGGACCTTTACTGCCTCCAGGGGGAAACATCGACGAAATGCTCAAAGAGCATGAAAGGCAAATCCAAGAGGCTGTCCGCAAAGCTCGTCTTGACAAGGCCAAGACTAAACAGAACTATGTTGATAATGCAGTCTTGAGCACTACTACACTCCGGGAGAAATGGTAG 2223 0.4768 MGCICSKRAAEDDYVENQREKGSSKSSKRLVAPSRREEIVVEVDASGSGGINGTARWISKPPAQEKVVSTPISSDEGGKRPLIIEQPALADHQRQVSLDIEVNGRLPLVSRLVSMPNGIAGEQVAAGWPPWLTAVAGEAIKGWLPRRADSFEKLNKIGQGTYSNVYRARDLETGKIVALKKVRFVNMDPESVRFMAREIYILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGILRIADFGLANFFHTDQKQPLTSRVVTLWYRPPELLLGATEYGVAVDLWSTGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWQKARLRHATIFKPQHPYNRCVSETFKEFPSSALSLMDVLLAIEPEDRGSAASALKSEFFKTKPLPCDPSSLPKYPPSKEFDAKLRVEETKRQKAAAIKGHGSESRRRGSRDSKAVPAPGANTELQESIQKRQGHSNPKSKSDKYNPQEDGGTGFPIEPPRGAARNGFSHSASLIHPSAFGSSWNKKVKEDESLARPKQALGTSNNGPELRTQRSHMPQVAANLSNFSGLVAARSSARLNNHRERNKGSHWPEQQLNARYNQLDDAEHSEKQERTHHLLDRPASPYKKGEKISGKESMVGYGPKKNRIHYSGPLLPPGGNIDEMLKEHERQIQEAVRKARLDKAKTKQNYVDNAVLSTTTLREKW* 741
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01074 740 Gene3D Transferase(Phosphotransferase) domain 1 234 475 - -
Eupl13g01074 740 FunFam probable serine/threonine-protein kinase At1g54610 234 475 - -
Eupl13g01074 740 SMART serkin_6 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01074 740 ProSiteProfiles Protein kinase domain profile. 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01074 740 Gene3D Phosphorylase Kinase; domain 1 138 233 - -
Eupl13g01074 740 CDD STKc_CDK9_like 151 435 - -
Eupl13g01074 740 FunFam probable serine/threonine-protein kinase At1g54610 138 233 - -
Eupl13g01074 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Eupl13g01074 740 Pfam Protein kinase domain 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01074 740 PANTHER CELL DIVISION PROTEIN KINASE 149 441 - -
Eupl13g01074 740 Coils Coil 700 720 - -
Eupl13g01074 740 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Eupl13g01074 740 MobiDBLite consensus disorder prediction 561 589 - -
Eupl13g01074 740 MobiDBLite consensus disorder prediction 465 543 - -
Eupl13g01074 740 MobiDBLite consensus disorder prediction 465 488 - -
Eupl13g01074 740 MobiDBLite consensus disorder prediction 573 589 - -
Eupl13g01074 740 SUPERFAMILY Protein kinase-like (PK-like) 145 443 IPR011009 -
Eupl13g01074 740 MobiDBLite consensus disorder prediction 657 688 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl13g01074 Eupl-Chr13 16879124 16896735 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01074 143 472 Core Cell Cycle Gene Families AT5G10270 52.586 4.75e-118 363
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl13g01074 Pkinase 1.2e-69 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01074 - - ming:122066851 1071.61