Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01046 ATGGCAGGAAAATGTTCGAACGCTTCTCCTTGGCCAAGGGAATGGGTGAAGGGCAATGCAATTGGGTCTGGATCCTTTGGCACTGTCAACTTGGCCATGAATAAATCCACTGGCGAGCTCTTCGTTGTGAAATCCGCTTCATCCGGAGCTGGACGTCAATCTCTGGAGAATGAGGCTACCATCCTTGAGAAGCTCAATTCGCCGTACATTGTCCAATGCCTTGGGAGGGATTTCTCGAATGAAGCAAATGGTGAACAGAAACTCAACCTCTTTATGGAATTCATGGCTGGGGGGAGCTTGTCAGATGTGGCAGAGAAGTTTGGTGGTGCTCTAGACGAGTCAGTGATCCGTCTTTACACCAGAGAGATCCTTCAGGGGCTTAAGTATCTCCACAAGAGAGGGATCGTGCACTGTGATCTCAAATGCAAGAATGTGCTCTTGGGTTCATCCGGAAAAATCAAATTGGCAGATTTTGGATGTGCAAAGAAGCTAAGCTCTTCGAAAACAGAGGGTTCGAAGAATTCTTGGCAATCTATATGTGGGACTCCATTGTGGATGGCACCAGAAGTTCTGAGAAATGAAGGATTGGACTTTGCTTCGGATGTTTGGTCTTTGGGTTGCACTGTCATTGAAATGGCCACTGGGAGATCTCCATGGGGCGATGACGTCTCAAGTCCAATGGCTGCAGTTCTCAAGATTGCATGTAGCAATGATACACCTCAGTTTCCAACCAAATTCTCTAAGGAGGGTTTGGATTTTTTGGCAAAATGCCTGTTGAGGGACCCAAATCTGAGGTGTAGTAGTGAGGAATTGCTTAACCATCCATTTGTTTCAGGGGATTCAGCACAGAGGAGTTCGAGCAAGGAGGTCACGTGGTCACCAGAAAGTATCTTTGATATTGGATTATATGATGCGGATTATGAGTCAGAGTCTCCAATCAGGGAAGAGCTTCCGAGCAGGATTCCATTCTCAACAAGGTGTAGTAGCCAAAAAGAGAGGATGATAAGAAGGCATGAAAGAGAGATCGATTTGATGTCATCAGAAAATTGGATTACTGTTAGATCAGGTTGA 1071 0.4585 MAGKCSNASPWPREWVKGNAIGSGSFGTVNLAMNKSTGELFVVKSASSGAGRQSLENEATILEKLNSPYIVQCLGRDFSNEANGEQKLNLFMEFMAGGSLSDVAEKFGGALDESVIRLYTREILQGLKYLHKRGIVHCDLKCKNVLLGSSGKIKLADFGCAKKLSSSKTEGSKNSWQSICGTPLWMAPEVLRNEGLDFASDVWSLGCTVIEMATGRSPWGDDVSSPMAAVLKIACSNDTPQFPTKFSKEGLDFLAKCLLRDPNLRCSSEELLNHPFVSGDSAQRSSSKEVTWSPESIFDIGLYDADYESESPIREELPSRIPFSTRCSSQKERMIRRHEREIDLMSSENWITVRSG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01046 356 Pfam Protein kinase domain 17 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01046 356 CDD STKc_MAPKKK 14 277 - -
Eupl13g01046 356 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 13 355 - -
Eupl13g01046 356 SUPERFAMILY Protein kinase-like (PK-like) 14 303 IPR011009 -
Eupl13g01046 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Eupl13g01046 356 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Eupl13g01046 356 SMART serkin_6 15 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01046 356 FunFam MAP kinase kinase kinase18 10 323 - -
Eupl13g01046 356 ProSiteProfiles Protein kinase domain profile. 15 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01046 356 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01046 Eupl-Chr13 16237452 16239181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01046 15 305 MAP Kinase Kinase Kinase AT4G26890 44.369 6.19e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl13g01046 Pkinase 2.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01046 K20716 - ming:122061277 511.531