Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01040 ATGGTCCTAACGCTAATTTTATGTGTGCAAACTATTTCATCCAACATGTACACATTCTCCCTACCAGATGAATTTCTATGGAACTTCTCCATCATTTCTTTCCTTCTACACCTCTTTAAAATCCTTACAAACATAATTTCCATGGCTCTGGGCTGTAATTCTTCTCCATCTTCTTCATCTTCTCCCTCATGGATGAGTTTTCTATCGCCAATTTTCATTCCGAAAGGCATTGCTTTAGCTTCCGAAGATCTTGTCACGGAGAATTCCCGACGTGAGACGTCGACAATCATCCCACTTGATGATTTGGCTTCTAAATCGCTTGTTTCAATCTCAAAAGGTTTATCGATCATGTCTGAAGAATCCCATAAAGAAATGTTGAGTTCCGAAATGTATTTTGAGAGAAATACACAAAAAGAATTGGGTGTTAGACATCAGGAGCTCGTTGTCAATGGCACATGTTTTGATTCTAAGGTGTACTTGGCGCCGACCGGAGAAGTTAAGGTAAGGAAGAGGCCGGCGAAGATCGTCATACCGGAATCTTGTTTGGGTTTGGATTTTGGTGCTGTGGGTGGAGAACTGCATCAGAAGGAATTTGAGGTTGAGGGGAGAGATTTTTTTTTGGCAAGTAGGAAAGGTAGGAGAGAGGTCATGGAAGATGGCCATGAAATTGTAACAGATATTATGGGAGATTCTAAGCAGGCGTTTTTTGGCGTGTTCGATGGACATGGCGGGCATGAAGCTTCAGATTATGTTAGTGAAAATTTAGGAAGGAATATCATAACAGCTATTGGAGAGGTCGAAAATGCAGAAGATCAGTTAGAGAAAGCGACTAGAGAAGGCTACTTGACCACGGATAAGGAGTTTCTTAGTAAGGCTGTAAGTAGTGGAGCTTGTGCAGCTACTGTCCTCTTGAAGAATGGGAAATTATGTGTAGCAAATGTTGGTGATTGTAGAGTAGTTTTGAGTAGGAAGGGAGTTGCTGATGCATTGACGAGCGATCACCGTGTTAATAGAGAAGACGAGCGCTATCGGATTGAGAGCTCGGGGGGTTATGTGAGTTGTCGAAATGGAGTTTGGAGAGTTCAAGGCTCCCTTGCAGTTTCTAGAGCAATTGGGGATTTGCATTTGAAGGAGTGGATAATTTCTGAACCAGAGATTAAGAAGCTTCCATTAACATCTGATTGTGAATTTTTAATAATGGCCACTGATGGATTGTGGGATAAGGTTACTAATCAGGAGGCAGTTGATGTGGTGTTAAGACACAAGAAGTCTATTGAGTCTTGCAGAAAGCTGGTGGATATTTCTTCTGGTAGAGGCAACAAGGATGACATAACTGTCATGGTGGTCTACCTTCAAAATTTTAAGACACAAGGGTAA 1377 0.4168 MVLTLILCVQTISSNMYTFSLPDEFLWNFSIISFLLHLFKILTNIISMALGCNSSPSSSSSPSWMSFLSPIFIPKGIALASEDLVTENSRRETSTIIPLDDLASKSLVSISKGLSIMSEESHKEMLSSEMYFERNTQKELGVRHQELVVNGTCFDSKVYLAPTGEVKVRKRPAKIVIPESCLGLDFGAVGGELHQKEFEVEGRDFFLASRKGRREVMEDGHEIVTDIMGDSKQAFFGVFDGHGGHEASDYVSENLGRNIITAIGEVENAEDQLEKATREGYLTTDKEFLSKAVSSGACAATVLLKNGKLCVANVGDCRVVLSRKGVADALTSDHRVNREDERYRIESSGGYVSCRNGVWRVQGSLAVSRAIGDLHLKEWIISEPEIKKLPLTSDCEFLIMATDGLWDKVTNQEAVDVVLRHKKSIESCRKLVDISSGRGNKDDITVMVVYLQNFKTQG* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01040 458 CDD PP2Cc 203 451 IPR001932 -
Eupl13g01040 458 SMART PP2C_4 194 449 IPR001932 -
Eupl13g01040 458 ProSiteProfiles PPM-type phosphatase domain profile. 204 451 IPR001932 -
Eupl13g01040 458 PANTHER PROTEIN PHOSPHATASE 188 450 IPR015655 GO:0004722|GO:0006470
Eupl13g01040 458 FunFam Probable protein phosphatase 2C 74 201 454 - -
Eupl13g01040 458 SMART PP2C_SIG_2 219 451 IPR001932 -
Eupl13g01040 458 SUPERFAMILY PP2C-like 205 453 IPR036457 -
Eupl13g01040 458 Coils Coil 259 279 - -
Eupl13g01040 458 ProSitePatterns PPM-type phosphatase domain signature. 235 243 IPR000222 GO:0043169
Eupl13g01040 458 Pfam Protein phosphatase 2C 208 443 IPR001932 -
Eupl13g01040 458 Gene3D - 195 458 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01040 Eupl-Chr13 16044142 16047245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01040 164 451 PP2C-type Phosphatase Gene Family AT1G07160 50.167 4.29e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01040 K17506 - msin:131242768 475.322