Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01033 ATGTTCCTGAATAGAATTAGCAAAATGGGTATTGAAGATCTTTGTAACACAGGTCTTGGACTTGGGTTAATCTGCGAAAGCACGCTTGATCACCAACGCCAGAAACCATGCTTCAAATTTGATAATTTGTTTCCGTCTTCCTCGAAAAATCTAGAGCCGTCACTAACATTAGGCCTTTCCGACGAGACGTATCAAACGATGGGTAAGATCGACATGAACAAGGCGTATGAGGAGTCCGTCGATGCACATCGACAAGCTTCTCCTCATAGCGCTGTCTCTTCTTTCTCTAACGCAAGCTTGAAGAGAGAGAAAGACCTTGGAAGTGAAGAGGTGGAGGTAGAAAGAGTCTCTTCAAGGGTCAGTGATGAAGATGAAGATGGTAGTACAAGAAAGAAACTTAGATTAACCAAGGAACAATCTGCCCTTTTGGAGGAGAATTTCAAAGAACACACTACTCTCAATCCGAAACAAAAACAAGCCTTAGCGAAACAATTGAATCTACGGCCTCGACAAGTAGAAGTGTGGTTCCAAAATAGGAGAGCCAGGACAAAGCTGAAGCAAACAGAAGTAGACTGCGAGTTCTTGAAGAAGTGTTGTGAGACTCTAACAGAGGAAAACAGGAGACTACAAAAGGAGCTCCAAGAGCTAAAAGCTTTAAAACTATCTTCACCATTGTACATGCAACTCCCAGCAGCTACCCTCACCATGTGCCCGTCTTGCGAGAGGATCGGCGGCGTCGGTGATACATCGTCGAAGAACCCATTTACAATGGCGCCCAAATCTCATTTCTATAATCCCTTCCCCCATCCATCTGCAGCTTGTTAG 825 0.4436 MFLNRISKMGIEDLCNTGLGLGLICESTLDHQRQKPCFKFDNLFPSSSKNLEPSLTLGLSDETYQTMGKIDMNKAYEESVDAHRQASPHSAVSSFSNASLKREKDLGSEEVEVERVSSRVSDEDEDGSTRKKLRLTKEQSALLEENFKEHTTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQKELQELKALKLSSPLYMQLPAATLTMCPSCERIGGVGDTSSKNPFTMAPKSHFYNPFPHPSAAC* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01033 274 ProSiteProfiles 'Homeobox' domain profile. 126 186 IPR001356 GO:0003677
Eupl13g01033 274 FunFam Homeobox-leucine zipper protein 18 114 191 - -
Eupl13g01033 274 CDD homeodomain 130 187 IPR001356 GO:0003677
Eupl13g01033 274 Pfam Homeobox associated leucine zipper 186 220 IPR003106 GO:0006355|GO:0043565
Eupl13g01033 274 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 17 260 - -
Eupl13g01033 274 SMART halz 186 229 IPR003106 GO:0006355|GO:0043565
Eupl13g01033 274 SMART HOX_1 128 190 IPR001356 GO:0003677
Eupl13g01033 274 Coils Coil 192 222 - -
Eupl13g01033 274 Pfam Homeodomain 130 184 IPR001356 GO:0003677
Eupl13g01033 274 ProSitePatterns 'Homeobox' domain signature. 161 184 IPR017970 GO:0000981|GO:0006355
Eupl13g01033 274 SUPERFAMILY Homeodomain-like 124 187 IPR009057 -
Eupl13g01033 274 Gene3D - 122 191 - -
Eupl13g01033 274 MobiDBLite consensus disorder prediction 106 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01033 Eupl-Chr13 15859039 15860338 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01033 9 274 Homeobox Transcription Factor Family AT4G37790 57.986 4.46e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl13g01033 Homeodomain 3.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01033 K09338 - nnu:104589130 381.719