Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01031 ATGGGTATTGAAGATCTTTGTAACACAGGTCTTGGACTTGGGTTAATCTGCGAAAGCACGCTTGATCACCAACGCCAGAAACCATGCTTCAAATTTGATAATTTGTTTCCGTCTTCCTCGAAAAATCTAGAGCCGTCACTAACATTAGGCCTTTCCGACGAGACGTATCAAACGATGGGTAAGATCGACATGAACAAGGCGTATGAGGAGTCCGTCGATGCACATCGACAAGCTTCTCCTCATAGCGCTGTCTCTTCTTTCTCTAACGCAAGCTTGAAGAGAGAGAAAGACCTTGGAAGTGAAGAGGTGGAGGTAGAAAGAGTCTCTTCAAGGGTCAGTGATGAAGATGAAGATGGTAGTACAAGAAAGAAACTTAGATTAACCAAGGAACAATCTGCCCTTTTGGAGGAGAATTTCAAAGAACACACTACTCTCAATCCGAAACAAAAACAAGCCTTAGCGAAACAATTGAATCTACGGCCTCGACAAGTAGAAGTGTGGTTCCAAAATAGGAGAGCCAGGACAAAGCTGAAGCAAACAGAAGTAGACTGCGAGTTCTTGAAGAAGTGTTGTGAGACTCTAACAGAGGAAAACAGGAGACTACAAAAGGAGCTACAAGAGCTAAAAGCTTTAAAACTATCTTCACCATTGTACATGCAACTCCCAGCAGCTACCCTCACCATGTGCCCGTCTTGCGAGAGGATCGGCGGCGTCGGTGATACATCGTCGAAGAACCCATTTACAATGGCGCCCAAATCTCATTTCTATAATCCCTTCCCCCATCCATCTGCAGCTTGTTAG 801 0.4469 MGIEDLCNTGLGLGLICESTLDHQRQKPCFKFDNLFPSSSKNLEPSLTLGLSDETYQTMGKIDMNKAYEESVDAHRQASPHSAVSSFSNASLKREKDLGSEEVEVERVSSRVSDEDEDGSTRKKLRLTKEQSALLEENFKEHTTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQKELQELKALKLSSPLYMQLPAATLTMCPSCERIGGVGDTSSKNPFTMAPKSHFYNPFPHPSAAC* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01031 266 ProSitePatterns 'Homeobox' domain signature. 153 176 IPR017970 GO:0000981|GO:0006355
Eupl13g01031 266 MobiDBLite consensus disorder prediction 94 123 - -
Eupl13g01031 266 MobiDBLite consensus disorder prediction 74 123 - -
Eupl13g01031 266 CDD homeodomain 122 179 IPR001356 GO:0003677
Eupl13g01031 266 Pfam Homeodomain 122 176 IPR001356 GO:0003677
Eupl13g01031 266 Coils Coil 184 214 - -
Eupl13g01031 266 SMART halz 178 221 IPR003106 GO:0006355|GO:0043565
Eupl13g01031 266 Pfam Homeobox associated leucine zipper 178 212 IPR003106 GO:0006355|GO:0043565
Eupl13g01031 266 FunFam Homeobox-leucine zipper protein 18 106 183 - -
Eupl13g01031 266 Gene3D - 114 183 - -
Eupl13g01031 266 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 252 - -
Eupl13g01031 266 MobiDBLite consensus disorder prediction 78 93 - -
Eupl13g01031 266 SMART HOX_1 120 182 IPR001356 GO:0003677
Eupl13g01031 266 ProSiteProfiles 'Homeobox' domain profile. 118 178 IPR001356 GO:0003677
Eupl13g01031 266 SUPERFAMILY Homeodomain-like 116 179 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01031 Eupl-Chr13 15796884 15798083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01031 1 266 Homeobox Transcription Factor Family AT4G37790 57.986 2.82e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl13g01031 Homeodomain 3.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01031 K09338 - nnu:104589130 381.719