Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01012 ATGAAGTCCATGAGTAATAATGACAACAGCAGCAACAACTGGTTGGGTTTTTCTCTCTCACCTCACATGAACATGGAGGTTCCTACAGACCCTCATCATCATCATCACCATCATCATCAAACACAGGCTTCCTCTGCTGCTGTCTCTCCTGCTGTTCCAACAAGCTTCTTTCTTTCTCCTTCTCAGCTAAACAACTCTGGAATCTGTTATGGGGTTGAAGGAGAGAATGGTGGGTTCTACTCACACTTGTCTGTAATGCCACTGAAGTCTGATGGGTCTCTTTGTATCATGGAAGCTCTCAGTAGATCACAACCAGAAGGGATGGTGCCATCTTCATCCCCAAAACTGGAGGACTTCTTAGGTGGTGCAACAATGGGAACCCATCAGTATGGAAGCAATGAGAGGGAAGCCATGGCTCTAAGCTTAGATAGCATGTATTACCACCAAAACTCACAGCCTGAAACCAATAGACAACATTCTCTGAACTTTCTTCAGCAACCATTCAGGCAGCCACAGCAACAGATTCATGTCCAACATCCATATTTCTCTGGACTAACAGGCCATGGGATGTACCAGACACCATTAGAGGAGACCAAGGAAACCCATCTTGGAAACTGCAGTCTGCAGCTCCCTCTAATGGCAGAGGATGGGATCTCAGGCCTGAAGAACTGGGTTACTAGGCATTATACTGATCATGCCATGGAGCAGAAGATGGCTGGTTGCTTGGGTGATGATGGTGGGGGGTCTGGGTCTATTGGTGCAATGGGGTATGGGGACTTACATTCTCTGAGCTTGTCCATGAGCCCTGGTTCACAGTCGAGCTGTGTTACAGCTCCACAGCAGATCTCACCTACTGGAACTGAGTGTGTGGCCATGGAAACAAACAAGAGAGGGTCTGGAAAGTTGGGTCAGAAGCAACCAGTTCACAGGAAGTCCATTGACACATTTGGGCAGAGAACATCACAGTATAGAGGTGTTACAAGGCATAGATGGACTGGTAGATATGAAGCCCATCTATGGGATAACAGTTGCAAGAAGGAAGGGCAGACCAGGAAAGGAAGGCAAGTTTATCTTGGGGGTTATGATATGGAGGAGAAAGCTGCAAGAGCTTATGATCTGGCGGCGCTCAAGTATTGGGGACCTTCGACCCATATCAACTTCCCGTTGGAGAATTACCAAGAAGAACTTGAAGAAATGAAGAACATGAGCAGGCAGGAATATGTTGCTCATTTGAGAAGGAAAAGCAGTGGGTTCTCAAGAGGAGCTTCGATATACCGAGGAGTTACAAGACATCATCAACATGGAAGATGGCAAGCTCGGATTGGCAGGGTTGCGGGAAACAAAGACCTTTATCTTGGGACATTCAGCACCCAAGAGGAAGCAGCTGAAGCGTATGACATTGCTGCAATCAAGTTTCGTGGTGTAAACGCTGTTACCAACTTTGACATAACAAGATATGATGTGGAACGGATTACAGCAAGTAGTACTCTCCTTGCTGGAGAACTTGCCAAGCGAAATAAAGAGATTGAATCCAGCAATGAGGCTGTCGATCACCACCCCTCTGCCCAGATAAGCAGAGAGGAAGCTGGTTTACCAGAAGAGAATGGTGGCTCAGACTGGAAGATGGTCCTTAATCAGTACTCTCCACAGCAGCCAACCACTACAGTTGAATCCCTCGATCAGAAGCCATTGGGCATTGGTAATTACAGGAACATGTCATTCTCTGTAGCCCTTCACGATCTGATTGGGACTGATACGATGAACTCAGCCCACCAAGGAGTGGACGAATCTGCCAAACTGGGGGCCCACTTGTCAAACACGTCCTCGATGGTGACTAGCTTGAGCAGCTCAAGAGAAGGTAGCCCTGATAAGACTGGTCTCTCGATGCTCTTCGCGAGGCCCCCATCAGCCTCCAAGTTCATCAGTCCTACTACCTCAACAAGTTCTTGGAACCCATCAGGCCAGATGAGGCCTGCAATCTCCATGTCTCACATGCCAGTATTTGCTGCTTGGACAGATGCCTAG 2025 0.478 MKSMSNNDNSSNNWLGFSLSPHMNMEVPTDPHHHHHHHHQTQASSAAVSPAVPTSFFLSPSQLNNSGICYGVEGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGMVPSSSPKLEDFLGGATMGTHQYGSNEREAMALSLDSMYYHQNSQPETNRQHSLNFLQQPFRQPQQQIHVQHPYFSGLTGHGMYQTPLEETKETHLGNCSLQLPLMAEDGISGLKNWVTRHYTDHAMEQKMAGCLGDDGGGSGSIGAMGYGDLHSLSLSMSPGSQSSCVTAPQQISPTGTECVAMETNKRGSGKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQEELEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERITASSTLLAGELAKRNKEIESSNEAVDHHPSAQISREEAGLPEENGGSDWKMVLNQYSPQQPTTTVESLDQKPLGIGNYRNMSFSVALHDLIGTDTMNSAHQGVDESAKLGAHLSNTSSMVTSLSSSREGSPDKTGLSMLFARPPSASKFISPTTSTSSWNPSGQMRPAISMSHMPVFAAWTDA* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01012 674 ProSiteProfiles AP2/ERF domain profile. 424 482 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 109 555 - -
Eupl13g01012 674 MobiDBLite consensus disorder prediction 25 46 - -
Eupl13g01012 674 FunFam AP2-like ethylene-responsive transcription factor ANT 321 390 - -
Eupl13g01012 674 SUPERFAMILY DNA-binding domain 321 390 IPR016177 GO:0003677
Eupl13g01012 674 MobiDBLite consensus disorder prediction 509 538 - -
Eupl13g01012 674 SMART rav1_2 424 488 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 SMART rav1_2 322 394 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 MobiDBLite consensus disorder prediction 509 524 - -
Eupl13g01012 674 CDD AP2 423 484 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 Coils Coil 389 409 - -
Eupl13g01012 674 CDD AP2 321 388 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 PRINTS Ethylene responsive element binding protein signature 323 334 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 PRINTS Ethylene responsive element binding protein signature 464 484 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 FunFam AP2-like ethylene-responsive transcription factor 423 484 - -
Eupl13g01012 674 Gene3D AP2/ERF domain 321 390 IPR036955 GO:0003700|GO:0006355
Eupl13g01012 674 Gene3D AP2/ERF domain 424 484 IPR036955 GO:0003700|GO:0006355
Eupl13g01012 674 ProSiteProfiles AP2/ERF domain profile. 322 388 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 Pfam AP2 domain 424 474 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 Pfam AP2 domain 322 380 IPR001471 GO:0003700|GO:0006355
Eupl13g01012 674 SUPERFAMILY DNA-binding domain 423 483 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01012 Eupl-Chr13 15350334 15354546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01012 405 674 AP2-EREBP Transcription Factor Family AT4G37750 25.240 9.86e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Eupl13g01012 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01012 K09285 - nnu:104609075 1043.49