Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01007 ATGGATTTTGGGGTGGTGGGTTTCGATGGTTTGGTGGGTTCTGAGGGTGGTTTTCCTGCCCTGGTTTCAGAAGCTGAAACCAGGCAAAAAGGGTATGGGTATGGGTCTGGGTTTCTTAAACAAGAGAGATCTGAGTCTGGTGAAGATGATTGGAGGAGCTTAAAAATGGCGAGAGCTGATGATTTCTCAGCCTCTAAGACAATGCTGCTTCAGCAGAGGACTCCTTCATTACCGAGATCTAATTCTCTGTTCTCTGATGGGCAGCAACAACAGCAGATGCTGAGCTTCGCTTCTCCCAAATCAGAAGCTTTGTTACTTTGTCAGGATGGTGGATTAGTAGAGAGGAGTTTACAAAATGCAACCTTGCCTTACTATCATCACACCTCCTCTACTTATGCTAGAAATACAGGTTTGGGTTCTGGAAGCTTGAATACAAGCATGCATGGAGCTTTTTCAGGTGTTAGAGGGCCATTCACTCCATCTCAGTGGATGGAGCTGGAACACCAGGCCTTGATTTACAAGTACATCAATGCAAATGTGCCCATACCTTCTAATTTGCTCATCCCCATCAGAAAAGCACTCAACCCATCTGACTTCTCCTGCTTTGCCGGATCCTTGAGACCCAATACATTGGGATGGGGTTCTTTCCATCTGGGTTTCTCCGGTAACACCGATCCTGAGCCAGGGAGGTGTCGTCGGACTGATGGGAAGAAATGGCGGTGCTCAAGAGATGCGGTTGCCGACCAGAAATACTGTGAGCGGCACATGAATAGGGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAAACTGGCCAAGCCGCCTCCAGACCCACCACCACAAAGGTGATGCCGATGGATACTTCCTCGTCAGCATCGGTGGTCTCTGCTGGCGGTGCATCCAACAGCCTTGCCATCACGCAGCACCAGATCAAGAGCGTGCAGCCTGGCGCCGCTGATCCTTCTGCAAACACCCACATCAGCAGGATTTTACTGAACAAAGATAACGTGGGTGGCCAAATCCAAGATTCACAGGGCCTCTCCATATCATCCACCATGAACCTGAAATCCAAAGACAACCCATTCTCCATTCCAAAACAACCCAACCCATTCGGAGAATCCTCTCGAATGGAGTTTGGACTTGTTTCGTCTGATTCTCTCCTGAATCATTCACAGAAAAGCCCTTACAGAGATTGCAGAAACTTTGGTTCTTCCTCTGACCTTAATGACCGAGAGCCCCGAGCCCAGTATCCCCTTCGTCATTTCATTGACGACTGGCCCAAGAACCGGTCTGATCGCTCGGCCATTACCTGGCCTGAAATTGAAATCCAATCAGACCCGACCCTGCTCTCAATTTCAATCCCTGTGGCTTCCTCAGACTTCTCGTCATCCTCTTCCTCACCCACCCATGAGAAACTTACTCTCTCACCACTGAGGTTATCGCGTGAATTTGATCCGATTCAGATGGGTTTAGGGGTGGGTTGTGTCCTAAATGAACCAACCCAACGGCAGGCGAACTGGATACCTATCTCTTGGGAGACTTCTATGGGGGGACCTCTCGGGGAGGTGTTGAACAACACCAATAACTCTGCGGGAGACTGCAAGAATTCATCAGCCCTTAACCTCATGACTGAAGGTTGGGATGCCAGCCCTCGGATGGGGTCGTCTCCTACCGGGGTCCTACAAAAGACCACCTTCGGCTCACTTTCAAACAGCAGCACAGGTAGCAGCCCAAGAGCAGAGACTAACAAGATCCATGATAGGGATAGCCTGTGCAACGGCCTCCTTGGCTCAACTCTTGTAAATTCATCGTCCATTCCTTCCTAG 1827 0.4997 MDFGVVGFDGLVGSEGGFPALVSEAETRQKGYGYGSGFLKQERSESGEDDWRSLKMARADDFSASKTMLLQQRTPSLPRSNSLFSDGQQQQQMLSFASPKSEALLLCQDGGLVERSLQNATLPYYHHTSSTYARNTGLGSGSLNTSMHGAFSGVRGPFTPSQWMELEHQALIYKYINANVPIPSNLLIPIRKALNPSDFSCFAGSLRPNTLGWGSFHLGFSGNTDPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEGQTGQAASRPTTTKVMPMDTSSSASVVSAGGASNSLAITQHQIKSVQPGAADPSANTHISRILLNKDNVGGQIQDSQGLSISSTMNLKSKDNPFSIPKQPNPFGESSRMEFGLVSSDSLLNHSQKSPYRDCRNFGSSSDLNDREPRAQYPLRHFIDDWPKNRSDRSAITWPEIEIQSDPTLLSISIPVASSDFSSSSSSPTHEKLTLSPLRLSREFDPIQMGLGVGCVLNEPTQRQANWIPISWETSMGGPLGEVLNNTNNSAGDCKNSSALNLMTEGWDASPRMGSSPTGVLQKTTFGSLSNSSTGSSPRAETNKIHDRDSLCNGLLGSTLVNSSSIPS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01007 608 MobiDBLite consensus disorder prediction 257 286 - -
Eupl13g01007 608 MobiDBLite consensus disorder prediction 390 413 - -
Eupl13g01007 608 PANTHER GROWTH-REGULATING FACTOR 5 89 463 IPR031137 GO:0005634|GO:0006351|GO:0032502
Eupl13g01007 608 MobiDBLite consensus disorder prediction 269 286 - -
Eupl13g01007 608 Pfam WRC 226 268 IPR014977 -
Eupl13g01007 608 MobiDBLite consensus disorder prediction 550 587 - -
Eupl13g01007 608 SMART QLQ_2 156 192 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl13g01007 608 ProSiteProfiles QLQ domain profile. 157 192 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl13g01007 608 MobiDBLite consensus disorder prediction 555 580 - -
Eupl13g01007 608 MobiDBLite consensus disorder prediction 390 411 - -
Eupl13g01007 608 Pfam QLQ 157 191 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl13g01007 608 ProSiteProfiles WRC domain profile. 225 269 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01007 Eupl-Chr13 15249273 15253075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01007 35 567 GRF Transcription Factor Family AT2G22840 46.099 2.25e-116 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl13g01007 WRC 3.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01007 - - nnu:104609045 896.73