Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01003 ATGTGGTTGTCCGAAGAAGTGGGTTTCGAAGGCGCTTTTACGCCATGGGAGTACCAGGAACTTATGTCTCTCTTTCTACCACAAAACCCTGTCAAATCGAATTCCGGTTCGATCGAGCCGAACCGGGCGGTTTCTGCCGAGGACGAACGAAAGCAGAGGCGGATGCTATCGAACCGGGATTCAGCGAAACGGTCTCGTATGCGTAAACAGAAGCATTTGGAAGACCTCCGGAACCAAGTGAACCGGCTGAGAACTGAAAACCGAGATATTGCAAACCAGTTGAGCATCACTACTCATAAGTGCCACCTCATACGGACAGATAACGACCGGCTCCGATTGGAATCCGTAATTCTCCGGCAGAGATTGTCAGATATTCACCGAATTTTAGTTTTACGGAAGCTCCAACACTTCTACTCCTCGCCGCCGTGCAAACCGTTACCTCCGTCAACGAACGAACTCCCTCATTAA 468 0.5 MWLSEEVGFEGAFTPWEYQELMSLFLPQNPVKSNSGSIEPNRAVSAEDERKQRRMLSNRDSAKRSRMRKQKHLEDLRNQVNRLRTENRDIANQLSITTHKCHLIRTDNDRLRLESVILRQRLSDIHRILVLRKLQHFYSSPPCKPLPPSTNELPH* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01003 155 Gene3D - 48 125 - -
Eupl13g01003 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 48 111 IPR004827 GO:0003700|GO:0006355
Eupl13g01003 155 SMART brlzneu 46 110 IPR004827 GO:0003700|GO:0006355
Eupl13g01003 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 53 68 IPR004827 GO:0003700|GO:0006355
Eupl13g01003 155 MobiDBLite consensus disorder prediction 30 79 - -
Eupl13g01003 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 33 132 - -
Eupl13g01003 155 MobiDBLite consensus disorder prediction 43 79 - -
Eupl13g01003 155 SUPERFAMILY Leucine zipper domain 50 101 IPR046347 GO:0003700|GO:0006355
Eupl13g01003 155 CDD bZIP_plant_GBF1 51 102 IPR045314 GO:0003700|GO:0006355
Eupl13g01003 155 Pfam bZIP transcription factor 50 102 IPR004827 GO:0003700|GO:0006355
Eupl13g01003 155 FunFam BZIP transcription factor 48 99 - -
Eupl13g01003 155 Coils Coil 59 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01003 Eupl-Chr13 15148892 15149450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01003 8 133 bZIP Transcription Factor Family AT3G49760 39.552 2.46e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl13g01003 bZIP_1 8.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01003 - - ming:122075101 161.384