Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00990 ATGAATTTTCAGGTTGCCAGCATAATCTTTCTAGATTCGCCTGTTGGAACTGGATTCTCATATTCAAGAACCTTGGAAGGTTCTAAGACTGGCGACACAAAATCATGCGATCAAATCTACCAATTTCTGAGAAAGTGGTTGATTGATCACCCCGAGTTCCTATCAAATCCGTTCTACGTTGCTGGTGATTCGTATTCTGGCAGGACCGTTCCACTTGTCGTTCAAGATATATCAGACGGTAATGGAGCAGGGAATGAACCGTTCATCAATCTCAAAGGGTATTTGCTTGGCAACCCAGCAACGGATTCAAATCCGGAAGCGGATACGCAAGTCCCATTTGCTTATGGAATGGGACTTGTATCTGACGAAATTTACGAGTCAATCAAGAGAAGCTGTGCAGGGGATTATATAAATGTAAATGGCAATGTGCAGTGCACACAAGATCTTGAAGCTTACCATAAGTGTACTACAGGAATTAATTTTGCCCACATTTTGGAACCCTTGTGCCCTTCCACACCCCCGAAACCAAAAGAGACGGCAGAGTATAAACGATCTCTCAGTGAGAATTTTCGAACAATCCTTGATCTAAAACCCATCCTTTCAATCAATCCACAAGCCTCGTATACTGCATCGGAGTGTAGGTCATATGGTTATTTGCTCTCCAATTACTGGATTAATGACATGACTGTACGGAAAGCTCTCCACATACAAGAGGGAACTGTAAAGGACTGGCAGAGGTGCTCCAATGGCATACATTATAACTTTGACATCGAGAGCAGCTTTAAATATCATGTAAATCTTAGTAAAAGAGGTTATCGATCTCTAGTGTACAGTGGTGATCATGACATGATTGTGCCATACTTGGCCACTCAAGCATGGATACGATCTCTCAACTACTCCATCATTGATGACTGGCGACAGTGGTCCGTCGATGGCCAAGTTGGAGGATACACGAGGACATATTCCAATAACATGACATTTGCGACGGTGAAGGGAGGTGGTCACACAGCTCCAGAGTACCAGCCTAAGGAATGCTTTGCAATGTTCAAGAGATGGATATCCAACAAGCCTCTATAA 1077 0.4327 MNFQVASIIFLDSPVGTGFSYSRTLEGSKTGDTKSCDQIYQFLRKWLIDHPEFLSNPFYVAGDSYSGRTVPLVVQDISDGNGAGNEPFINLKGYLLGNPATDSNPEADTQVPFAYGMGLVSDEIYESIKRSCAGDYINVNGNVQCTQDLEAYHKCTTGINFAHILEPLCPSTPPKPKETAEYKRSLSENFRTILDLKPILSINPQASYTASECRSYGYLLSNYWINDMTVRKALHIQEGTVKDWQRCSNGIHYNFDIESSFKYHVNLSKRGYRSLVYSGDHDMIVPYLATQAWIRSLNYSIIDDWRQWSVDGQVGGYTRTYSNNMTFATVKGGGHTAPEYQPKECFAMFKRWISNKPL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00990 358 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 4 342 IPR001563 GO:0004185|GO:0006508
Eupl13g00990 358 FunFam Carboxypeptidase 212 357 - -
Eupl13g00990 358 SUPERFAMILY alpha/beta-Hydrolases 4 357 IPR029058 -
Eupl13g00990 358 FunFam Carboxypeptidase 261 355 - -
Eupl13g00990 358 Pfam Serine carboxypeptidase 4 355 IPR001563 GO:0004185|GO:0006508
Eupl13g00990 358 Gene3D alpha/beta hydrolase 3 358 IPR029058 -
Eupl13g00990 358 PRINTS Carboxypeptidase C serine protease (S10) family signature 11 21 IPR001563 GO:0004185|GO:0006508
Eupl13g00990 358 PRINTS Carboxypeptidase C serine protease (S10) family signature 325 338 IPR001563 GO:0004185|GO:0006508
Eupl13g00990 358 PRINTS Carboxypeptidase C serine protease (S10) family signature 46 71 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00990 Eupl-Chr13 14891961 14910802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00990 217 358 Calmodulin-binding Proteins AT2G22960 62.238 2.27e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00990 K16296 - nnu:104611578 496.893