Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00989 ATGGGTAATGGGAACTTAGAGGATTGGATTCGAGGAAGGAGAAGGCATGTGGGTCTAGATGGTTTGAATGTTTTGGAAAGGTTGAACATGGCCATTGATATTGCATGTGCCATGGACTACCTTCACCATGACTGTGACGCTCTAGTGGTGCACTGTGACGTTAAGCCAAGCAACATACTCTTATGCGAGGACATGACTGCAAAGGTGGGAGACTTTGGGCTGAAAAGGAGGTGGTGGAGGCAGCTGGAGATCAGCAATATTACCACTACCGATGGTCTCAAGGGCTCCATAGGATATATTCCCCCCGGGGAGTTCTTTCTCTTAATAGTACGGGATGGGTGGGAAACCGTCAACAAGAGGAGATGTTTACAGCTACGGAATAATGTTGCTACAGCTCTTCACAGGGAGAAGCCCCACTCATGA 423 0.4823 MGNGNLEDWIRGRRRHVGLDGLNVLERLNMAIDIACAMDYLHHDCDALVVHCDVKPSNILLCEDMTAKVGDFGLKRRWWRQLEISNITTTDGLKGSIGYIPPGEFFLLIVRDGWETVNKRRCLQLRNNVATALHREKPHS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00989 140 PANTHER RECEPTOR-LIKE PROTEIN 55 1 102 - -
Eupl13g00989 140 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Eupl13g00989 140 SUPERFAMILY Protein kinase-like (PK-like) 1 102 IPR011009 -
Eupl13g00989 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00989 140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
Eupl13g00989 140 Pfam Protein kinase domain 26 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00989 Eupl-Chr13 14887866 14891162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00989 1 102 Receptor kinase-like Gene Family AT3G47090 44.860 2.28e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl13g00989 Pkinase 1.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00989 - - mof:131161925 144.821