Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00983 ATGTCTTTATCCCCGGAACACTCTGCTTCTAGTCTATACTGCTGCGAAGACGCCGGCGATTTAGCCTCCTGGGATGCTGACACTTGGATCCATGTTCCTCCTACAACCACTGATTTCCCGTCCAACGATGATGAACTTTTGATTGCCAGGCTCATCGATTCTGAGCTCGATCACATGCCCCAATCTGATTATCTCCGACGCATACGCGATCGTTCGATCGATGCCACCACCCGTCAAGATGCCATTAACTGGATAGCAAAGGTGCATGCATACTATCACTTCAGACCAGTAACGGCGTATCTCTCCGTCAACTACCTCGACCGATTCCTTTCGTCTTATACTCTGCCGCAAGGGAATGCGTGGTCTTTACAGCTGTTATCGGTGGCGTGTTTGTCTCTAGCAGCGAAAATGGAGGAAACGAGTGTTCCCCTTCTCTTAGACTTACAGGTGTTCGAACCAAGGTTCCTGTTCGATCCCAGAACGGTTCGACGGATGGAGCTTTTAGTCATGGCCAATCTCAAATGGAGACTGCGCTCTGTAACGCCTTTCGATTTCGTCGATTATTTCGTCTCAAAGCTTCCATGTTTCGGTTCCCGATACGCGCTTTTCTCTCGTGCTTCAGATCTTATTCTCAACACTTGTCGAGTGATCGATTTCTTGGGTTATCCGCCGTCGACGATAGCTGCGGCGGCTGTGCTTCTCGCTTCCCGCGACAGCGTCGGTTTTCCGGCAGTGGAAGATCGGGAAATGGCGACGTTTTACGAGAGAGTGAGCAAAGAAATGGTGAGAGGCTGTCACCAACTAATGGAGGACTACTTGATTGACACGTGTCCTTCATTTCGCCTTAAACACGGGAGATCAGAGCCGGCGCCTCCGCAGAGTCCGGTCGGCGTGCTGGATGCAGCTGCGTGCGGGAGCTGCGATTCTCAGAAGTCTGGTTCCGAGAAACCGGAGCTAAGCCAAGCGGAGCCGTCGAACAAACGAAGAAAGTCGACTGCATTGGATGTACAGCAACTATAG 1020 0.5137 MSLSPEHSASSLYCCEDAGDLASWDADTWIHVPPTTTDFPSNDDELLIARLIDSELDHMPQSDYLRRIRDRSIDATTRQDAINWIAKVHAYYHFRPVTAYLSVNYLDRFLSSYTLPQGNAWSLQLLSVACLSLAAKMEETSVPLLLDLQVFEPRFLFDPRTVRRMELLVMANLKWRLRSVTPFDFVDYFVSKLPCFGSRYALFSRASDLILNTCRVIDFLGYPPSTIAAAAVLLASRDSVGFPAVEDREMATFYERVSKEMVRGCHQLMEDYLIDTCPSFRLKHGRSEPAPPQSPVGVLDAAACGSCDSQKSGSEKPELSQAEPSNKRRKSTALDVQQL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00983 339 SUPERFAMILY Cyclin-like 45 177 IPR036915 -
Eupl13g00983 339 FunFam D6-type cyclin 175 267 - -
Eupl13g00983 339 Gene3D - 50 267 - -
Eupl13g00983 339 SMART Cyclin_C_2 180 293 IPR004367 -
Eupl13g00983 339 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Eupl13g00983 339 SMART cyclin_7 191 267 IPR013763 -
Eupl13g00983 339 SMART cyclin_7 83 171 IPR013763 -
Eupl13g00983 339 SUPERFAMILY Cyclin-like 161 274 IPR036915 -
Eupl13g00983 339 Gene3D - 61 178 - -
Eupl13g00983 339 MobiDBLite consensus disorder prediction 307 339 - -
Eupl13g00983 339 CDD CYCLIN_AtCycD-like_rpt1 78 175 - -
Eupl13g00983 339 Pfam Cyclin, N-terminal domain 50 177 IPR006671 -
Eupl13g00983 339 Pfam Cyclin, C-terminal domain 180 273 IPR004367 -
Eupl13g00983 339 PANTHER CYCLINS 53 270 IPR039361 -
Eupl13g00983 339 CDD CYCLIN_AtCycD-like_rpt2 180 269 - -
Eupl13g00983 339 FunFam D2/4-type cyclin 61 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00983 Eupl-Chr13 14789547 14791615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00983 12 276 Core Cell Cycle Gene Families AT1G70210 43.015 2.67e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00983 K18810 - nnu:104608694 455.677