Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl13g00955 | ATGAAGATGGAGATTCCGGCAAGCGACGCATACATGGGACGGAGCCTTGGTGATCTGAGCAACGGTGATTATTCGTCCACGGCCTTTAGCGATTGCAATAGCGATAGATCCGGAGAGTTCTCGACAACCTCTTCGCAGAGCCGTGGTCTCCTGATTGCTTGCGCTTCTGCGAATTCCTCCGATGTGATCCGTCAGCTTGTATCCGATCTCGAGTCCTGTTCGATCGACGTGCAGAGACAAGCAGCCCTGGAGATTCGCCTCCTCGCGAAGGACAAGCAAGAAAATCGCCTCAAGATTGTTCGAGCTGGTGCTGTAAGACCTCTTATTTCTTTTATCTTGTCTTCTGATTCTCAGCTTCAAGAGTACGGCGTCACAGCGATATTAAACCTTTCTCTGTGCGATGATAACAAAGATCTAATCGTCAATTCGGGGGCGATTAAACCACTCGCGAGAGCTCTCAATACCGGAACCGCGACGGCGAAGGAGAACGCAGCTTGTGCTCTGCTTCGCCTCTCGCAGATCGAAGAGAACAAAATTTTGATTGGCCGGTCAGGAGCGATCCCTCTCCTGGTTAAATTATTGGAGAACGGAAGTTCTCGCGGGAAAAAGGACGCATCAACTGCTCTTTATTCGCTCTGTTCCCTGAAGGAGAACAAAATCAGAGCCGTTAAAGCCGGAATCATGAAACCACTCGTGGAATTAATGGCAGATTTCGAGTCTGGTATGGTTGATAAAGCGGCTTTCGTTCTGAGCACCCTGGTTGCGGTTCCGGAAGCAAAAACCACTTTGGTTGAGGAGGGTGGTATTCCGGTACTGGTCGAAATCGTGGAGGTCGGACAAAAACGTCAGAAGGAGATCGCAACGGTGATTTTACTGGAGATCTGCGAAAACAGCTTGGCGTATCGGACTATGGTAGCCCGCGAAGGAGCGATACCGCCGTTGGTCGCTTTGTCACAGTCCGGCACGACTCGAGCTAAACAGAAGGCGGAGACACTCATTGAGCTTCTACGGCAACCGAGATCCGGCAATCGCGCAGAATAG | 1041 | 0.5091 | MKMEIPASDAYMGRSLGDLSNGDYSSTAFSDCNSDRSGEFSTTSSQSRGLLIACASANSSDVIRQLVSDLESCSIDVQRQAALEIRLLAKDKQENRLKIVRAGAVRPLISFILSSDSQLQEYGVTAILNLSLCDDNKDLIVNSGAIKPLARALNTGTATAKENAACALLRLSQIEENKILIGRSGAIPLLVKLLENGSSRGKKDASTALYSLCSLKENKIRAVKAGIMKPLVELMADFESGMVDKAAFVLSTLVAVPEAKTTLVEEGGIPVLVEIVEVGQKRQKEIATVILLEICENSLAYRTMVAREGAIPPLVALSQSGTTRAKQKAETLIELLRQPRSGNRAE* | 347 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl13g00955 | 346 | SUPERFAMILY | ARM repeat | 59 | 336 | IPR016024 | - | |
Eupl13g00955 | 346 | Gene3D | - | 160 | 343 | IPR011989 | - | |
Eupl13g00955 | 346 | PANTHER | U BOX DOMAIN-CONTAINING | 62 | 337 | - | - | |
Eupl13g00955 | 346 | FunFam | RING-type E3 ubiquitin transferase | 52 | 342 | - | - | |
Eupl13g00955 | 346 | Gene3D | - | 39 | 159 | IPR011989 | - | |
Eupl13g00955 | 346 | SMART | arm_5 | 133 | 173 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | SMART | arm_5 | 215 | 255 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | SMART | arm_5 | 256 | 296 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | SMART | arm_5 | 297 | 338 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | SMART | arm_5 | 92 | 132 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | SMART | arm_5 | 174 | 214 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 103 | 145 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | Pfam | Armadillo/beta-catenin-like repeat | 176 | 214 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | Pfam | Armadillo/beta-catenin-like repeat | 134 | 172 | IPR000225 | GO:0005515 | |
Eupl13g00955 | 346 | Pfam | Armadillo/beta-catenin-like repeat | 93 | 131 | IPR000225 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl13g00955 | Eupl-Chr13 | 14356561 | 14358657 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl13g00955 | 38 | 343 | U-box Gene Family | AT2G23140 | 49.045 | 1.23e-89 | 280 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl13g00955 | - | - | nnu:104590389 | 535.028 |