Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00952 ATGAACTCTGACTCTTCTTTCTCCCTCTCTAGCCTTCTCTGCAGAGAAAGCGAAGCTTGTTTGGATGATCAAGAAGTGGAAGAAAACGTTTTTATTAACTTAAGAAATCACGCTCTCTTAGAGAACGAAGATGAATATATAGAAACTCTGGTTGAAAAGGAGAACACTTTTGGAACAAAAAACTACGGATCTTCAGTAGATTCTTTGAAGATTACTCAAGAATGGTTGAAATTTGCTCGTCTGGATGCCATCAAATGGATTCTCGAAACAAGGGCGTTTTTCGGGTTTGGCTTTCAAACAGCTTATTTGTCTGTGACTTACTTTGATCGGTTCTTATTGAAGCGAGCCATCGATAGTGAGAAATCTTGGGCGATTCGATTACTATCTATTGCGTGTTTATCATTGGCGGCAAAGATGGAAGAATGCAGAGTTCCTACCCTATCAGAGTTTCAGATAGAAGAGTACAATTTTGAAAGCAAGGTGATTCAAAGAATGGAGCTTCTGGTTTTGAATACTTTAGAATGGAGAATGGGTTCAATTACTCCATTTTCTTATCTACATTACTTCATCACCAAATTTAGCGATCAATCTCGACCACCCAAAGATTTAATATGTATAACTGTCGAACTTATTTTGGCCTTAATCAAAGAGATGAACTTAATGGATCATCGACCATCTGTTATAGCTGCGGCGGCAGTCTTAGCAGCATCAGATAAGAGATTAACAAGAGAAAATGTGGAGGTTAAGATGAGTATGATCTCATCATGTAAGTCTCTAGAAAATGAGCATGTGTTTTCCTGTTATAATTTGATGCAGGAATTACAGATGGGGAAATTAAAAACACCCAAGTTTGTGATTTCCCCAGATCTATCATCAATTTATTCAAGCACGACGACGACGACGACCCATGTTATTGACGATTCTACTACATTCGTCTCTGGTTCTGGATCTAAGAGGAGAAGGTTTACATTCTAA 975 0.3805 MNSDSSFSLSSLLCRESEACLDDQEVEENVFINLRNHALLENEDEYIETLVEKENTFGTKNYGSSVDSLKITQEWLKFARLDAIKWILETRAFFGFGFQTAYLSVTYFDRFLLKRAIDSEKSWAIRLLSIACLSLAAKMEECRVPTLSEFQIEEYNFESKVIQRMELLVLNTLEWRMGSITPFSYLHYFITKFSDQSRPPKDLICITVELILALIKEMNLMDHRPSVIAAAAVLAASDKRLTRENVEVKMSMISSCKSLENEHVFSCYNLMQELQMGKLKTPKFVISPDLSSIYSSTTTTTTHVIDDSTTFVSGSGSKRRRFTF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00952 324 SUPERFAMILY Cyclin-like 41 177 IPR036915 -
Eupl13g00952 324 Pfam Cyclin, C-terminal domain 180 275 IPR004367 -
Eupl13g00952 324 PANTHER CYCLINS 42 275 IPR039361 -
Eupl13g00952 324 FunFam Cyclin-D5-1 179 268 - -
Eupl13g00952 324 CDD CYCLIN_AtCycD-like_rpt1 79 175 - -
Eupl13g00952 324 Gene3D - 179 269 - -
Eupl13g00952 324 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Eupl13g00952 324 Gene3D - 71 178 - -
Eupl13g00952 324 SUPERFAMILY Cyclin-like 163 285 IPR036915 -
Eupl13g00952 324 Pfam Cyclin, N-terminal domain 65 177 IPR006671 -
Eupl13g00952 324 FunFam Cyclin-D5-1 75 178 - -
Eupl13g00952 324 SMART Cyclin_C_2 180 303 IPR004367 -
Eupl13g00952 324 CDD CYCLIN_AtCycD-like_rpt2 180 271 - -
Eupl13g00952 324 SMART cyclin_7 188 273 IPR013763 -
Eupl13g00952 324 SMART cyclin_7 85 171 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00952 Eupl-Chr13 14310243 14312505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00952 8 261 Core Cell Cycle Gene Families AT4G37630 42.804 1.65e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00952 K18811 - nnu:104590640 399.438