Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00950 ATGTTTGAGACTCTATTTGGCTGCAATTCCACAAATCCAGTTAAAAAAGAATCAACTAGAAGATCAGTTCTCCCTCCTGGTGAACTGGAGAACAGGGTATTGGACCCAAAGAAGTCACAGAACATAGCTATACTTCTAAGGGCATTGAATGTAACACGAGATGAGGTGTCTGAAGCACTTTTAGATGGTAATCCTGAAGGTTTGGGTGCTGAGCTATTAGAAACTTTGGTGAAGATGGCTCCGACCAAAGAGGAAGAACTAAAACTGAGAAATTACAGCGGTGACATGTCAAAATTAGGCTCTGCAGAGCGATTCCTCAAGGCAGTGCTGAATATACCATATGCCTTTAAAAGAGTTGATGCCATGCTATACAGAGCCAATTTCGATACAGAAGTGAAATACTTGAGGAAGACTTTTGAAACCCTAGAGGTAGCATGTGAAGAGTTGAAAAACAGTAGGTTATTTCTGAAAATCCTGGAAGCTGTTCTCAGGACAGGGAATCGGATGAATGTTGGCACCAACCGGGGTGACGCAAGAGCTTTTAAGCTCGATACACTCCTAAAACTAGTAGATGTAAAAGGAGCAGATGGTAAAACAACATTGCTCCATTTTGTGGTGCAAGAGATTATTAGATCTGAAGGTGCAGATTCTGATCCTACGCCTGAGAATCTTCTCAACAAAATGTACCCCAAGGTGAAGGAGGATGATTTCAAGAAACAAGGTTTGCAGGTTGTGGCCGGACTCAGCAGAGAACTTGGCAATGTTAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAACAGCTATGTGTCGAAGCTGGAAATGGGACTTGCGAAAGTCAGATTGGTTTTGCAATATGAAAAGTCAAATACGCAGGGGAAATTCTTTGAGGCGATGAAGTTATTCCTCAATGAGGCAGAAGAGGAGATACTTGGAATTAAAGCAGATGGAAAAAAGGCTTTATCCCATGTAAAAGAGGTCACAGAGTACTTTCATGGAGACGCGACAAAGGAGGGAGCTCATCCTTTCAGAATCTTCATGGTTGTCAGAGATTTCCTCTCGGCCTTGGATCAGGCATGCAAAGAAGTGGGAAAAATGCACGAGAGAGCAATGGTGGGTTCTGCTAGATCATTTCGGATAACTGCAAGCACTTCATTACCAGTTTTCAATAGATTCAATACAAGACAACATGAAAGTTCAGACGAGGATAGCTCATCTCCATAA 1224 0.4216 MFETLFGCNSTNPVKKESTRRSVLPPGELENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEELKLRNYSGDMSKLGSAERFLKAVLNIPYAFKRVDAMLYRANFDTEVKYLRKTFETLEVACEELKNSRLFLKILEAVLRTGNRMNVGTNRGDARAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGADSDPTPENLLNKMYPKVKEDDFKKQGLQVVAGLSRELGNVKKAAGMDSDVLNSYVSKLEMGLAKVRLVLQYEKSNTQGKFFEAMKLFLNEAEEEILGIKADGKKALSHVKEVTEYFHGDATKEGAHPFRIFMVVRDFLSALDQACKEVGKMHERAMVGSARSFRITASTSLPVFNRFNTRQHESSDEDSSSP* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00950 407 MobiDBLite consensus disorder prediction 1 21 - -
Eupl13g00950 407 Pfam Formin Homology 2 Domain 2 356 IPR015425 -
Eupl13g00950 407 SUPERFAMILY Formin homology 2 domain (FH2 domain) 32 372 - -
Eupl13g00950 407 Gene3D Formin, FH2 domain 1 379 IPR042201 -
Eupl13g00950 407 SMART it6_source 3 371 IPR015425 -
Eupl13g00950 407 MobiDBLite consensus disorder prediction 1 18 - -
Eupl13g00950 407 PANTHER FORMIN-RELATED 1 401 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Eupl13g00950 407 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 382 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00950 Eupl-Chr13 14269991 14275181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00950 2 399 FH2 protein (formin) Gene Family AT5G67470 70.823 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00950 - - ming:122072612 645.966