Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl13g00937 | ATGGCTCTCGAAGCTCTGAATTCCCCCTCCACAGCCACTCCTTCCTTTCCCTACGACGACGTCGAACTCCACTATCTTGAACCGTGGATGAAGCGGAAGCGCTCCAAGCGTCACCGTCTCGAGAACCCTCCCACTCCCACAGAAGAAGAGTATCTGGCTCTCTGTCTTGTTATGCTCGCTCGTGGCGGTGCCACTGCTGGTGGAACTGGAACCTTTGTTTCACAACGGAATTATTCCCCTCCTCCACCACCGACGCTGAAGCTCAACTACAAGTGTACTGTCTGCAACAAAGCCTTCGCGTCTTACCAAGCCCTAGGTGGACACAAGGCGAGTCACCGAAAACTCGCTGGAGCATCCGAGGATCATTCCACAACTACCACCATCACCACAACAACAACTAACAGCACAACCGTCAATCCAGGTGGTAGGACCCACGAGTGCTCTGTTTGCCACAAATCTTTTCCATCCGGACAAGCCTTGGGTGGACACAAGCGCTGTCACTATGACGGTGGAAGTAGCGGTGTTACCACATCTGATGGCGTGGGTTCGAGTCTAAGCCACCGAGATTTCGACTTGAATTTACCGGCTTTGCCTGAATTCTGGCCGGGTCTTGGCGTTGATGGTGTCCGGAATTGTCAGATTTCCGGGGATGAGGAAGTGGAGAGCCCTCTACCGATGAAGAAGCCACGTCTGCTGATTCCGGCCTAG | 708 | 0.5381 | MALEALNSPSTATPSFPYDDVELHYLEPWMKRKRSKRHRLENPPTPTEEEYLALCLVMLARGGATAGGTGTFVSQRNYSPPPPPTLKLNYKCTVCNKAFASYQALGGHKASHRKLAGASEDHSTTTTITTTTTNSTTVNPGGRTHECSVCHKSFPSGQALGGHKRCHYDGGSSGVTTSDGVGSSLSHRDFDLNLPALPEFWPGLGVDGVRNCQISGDEEVESPLPMKKPRLLIPA* | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl13g00937 | 235 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 32 | 200 | IPR044653 | GO:0003700 | |
Eupl13g00937 | 235 | MobiDBLite | consensus disorder prediction | 116 | 142 | - | - | |
Eupl13g00937 | 235 | Pfam | C2H2-type zinc finger | 145 | 169 | - | - | |
Eupl13g00937 | 235 | Pfam | C2H2-type zinc finger | 90 | 114 | - | - | |
Eupl13g00937 | 235 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 147 | 167 | IPR013087 | - | |
Eupl13g00937 | 235 | Gene3D | Classic Zinc Finger | 88 | 167 | - | - | |
Eupl13g00937 | 235 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 145 | 167 | IPR013087 | - | |
Eupl13g00937 | 235 | MobiDBLite | consensus disorder prediction | 120 | 142 | - | - | |
Eupl13g00937 | 235 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 92 | 112 | IPR013087 | - | |
Eupl13g00937 | 235 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 90 | 112 | IPR013087 | - | |
Eupl13g00937 | 235 | SUPERFAMILY | beta-beta-alpha zinc fingers | 90 | 167 | IPR036236 | - | |
Eupl13g00937 | 235 | SMART | c2h2final6 | 145 | 167 | IPR013087 | - | |
Eupl13g00937 | 235 | SMART | c2h2final6 | 90 | 112 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl13g00937 | Eupl-Chr13 | 14062736 | 14064013 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl13g00937 | 1 | 235 | C2H2 Transcription Factor Family | AT1G27730 | 48.810 | 1.22e-64 | 199 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Eupl13g00937 | zf-C2H2_6 | 5.1e-13 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl13g00937 | - | - | nnu:104611626 | 314.694 |