Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00934 ATGGCCGCAAGGCCTCTACGTTTCTTCATTTCCCACCGACTCGTTTCCTCCCGTCCAACGTTTCATCCTTCTCTACCCCTAAGAAGAGAAGAAAAACCAATACCTCTTCTGAGCCTCCGGACGATCGTCTGCGGGGCCCCACGCGCTCACCCAGAACAACAACACCCAGAACATCACCGCCGTCCATCACCATCATCACCACCACCACCACCACCATCATCACCACCACCACCACCACCATCATCAACCGTACCTGAAAACCTGGCGCAAAGAATCGGGAAATCCATTCGGAGGCCCGGGGCCACCTCCAAGGCTAGGGTTCATGCCGACGTAAATGTCCTCCGACCCAAAGAATATTGGGATTACGAGTCCCTTACCGTCCAATGGGGAGAACAAGACGATTACGAGGTGGTTAGGAAGGTGGGAAGGGGGAAATACAGCGAGGTCTTCGAGGGTGTCCATTCCACCGACAATGAGCGCTGCATTATTAAGATCCTCAAGCCTGTCAAGAAGAAGAAGATAAAGAGGGAGATAAAAATATTGCAGAACCTTTGCGGTGGTCCAAATATTGTGAAATTGCTGGATATTGTCAGAGATCAGCAATCAAAGACCCCTAGTTTAATATTTGAATATGTGAACAACACTGATTTTAAAGTGCTTTATCCGACACTGACAGACTATGATACCAGATATTACATCTATGAACTATTGAAGGCATTAGACTACTGTCACTCACAAGGTATCATGCACCGAGATGTGAAGCCCCACAATGTCATGATTGATCACGAGCAGCGTAAGCTTCGTCTGATAGATTGGGGGCTTGCAGAGTTCTATCATCCCGGGAAAGAATATAATGTTCGTGTTGCTTCAAGATATTTCAAAGGCCCAGAGCTTCTTGTTGATTTGCAAGACTATGATTATTCTTTAGACTTGTGGAGTCTTGGTTGTATGTTTGCCGGAATGATATTCCGTAAGGAGCCATTTTTCTATGGGCATGATAATTATGATCAATTGGTCAAAATAGCTAAGGTACTCGGGACGGACGAATTAAATGCGTATCTAAGCAAATACCGCTTGGATTTGGACCCACACCTTGAGGCCCTTGTGGGGAGGCATAGCAGGAAGCCGTGGACAAAGTTCATTAATGCTGATAATCAACATTTGGCAGTTCCTGAGGCTGTTGACTTTCTTGACAAATTGCTGCGATATGATCACCAGGAAAGGCCGACTGCAAAAGAAGCAATGGCCCATCCTTACTTTTATCCAGTGAGAAGTGCAGAAAGCAGCAGGACTCGTACTCAGTAG 1305 0.4651 MAARPLRFFISHRLVSSRPTFHPSLPLRREEKPIPLLSLRTIVCGAPRAHPEQQHPEHHRRPSPSSPPPPPPSSPPPPPPSSTVPENLAQRIGKSIRRPGATSKARVHADVNVLRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHSTDNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLTDYDTRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLSKYRLDLDPHLEALVGRHSRKPWTKFINADNQHLAVPEAVDFLDKLLRYDHQERPTAKEAMAHPYFYPVRSAESSRTRTQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00934 434 FunFam Casein kinase II subunit alpha 212 423 - -
Eupl13g00934 434 MobiDBLite consensus disorder prediction 50 86 - -
Eupl13g00934 434 SMART serkin_6 135 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00934 434 MobiDBLite consensus disorder prediction 63 84 - -
Eupl13g00934 434 ProSiteProfiles Protein kinase domain profile. 135 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00934 434 SUPERFAMILY Protein kinase-like (PK-like) 108 423 IPR011009 -
Eupl13g00934 434 Pfam Protein kinase domain 135 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00934 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Eupl13g00934 434 PANTHER CASEIN KINASE II SUBUNIT ALPHA 100 430 IPR045216 GO:0004674|GO:0006468
Eupl13g00934 434 Gene3D Transferase(Phosphotransferase) domain 1 212 420 - -
Eupl13g00934 434 CDD STKc_CK2_alpha 116 421 IPR045216 GO:0004674|GO:0006468
Eupl13g00934 434 Gene3D Phosphorylase Kinase; domain 1 135 211 - -
Eupl13g00934 434 FunFam Casein kinase II subunit alpha 121 211 - -
Eupl13g00934 434 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00934 Eupl-Chr13 13999740 14013047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00934 133 420 Core Cell Cycle Gene Families AT1G76540 30.794 2.27e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Eupl13g00934 Pkinase 3.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00934 K03097 - nnu:104608115 717.998