Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00910 ATGGATGGGAATCATGAAATGGTCCAGATTGACTACGTGGACAACGATGTCATGCATATCCATACTACTGTAGTTTTCCCTTACAAATGTGATACCCCACTGAGTAAATCTGGAGAGGCACTGCAGAGTAAATTAAATCCACCTTCCAGCGAGAGGGACTTGAGAAGAGAGAGAGAGGGGCTGCGTTGCGACGACTACGACTCGGGACTCAGGGAGTCCGCGGGCCGATCGTCTTTCCGCGTCTATCTTTTAGGTGAGTGGAGAATTTTGCAGAGAGGAAACCTTTCTTTGACCTTTCTGTGTTTGTGTGTGAGAGAGAGAACGAGGAAGATGTCAGATTCTTCTTTGGTTGGTGGTTTTGTGGATCCAAGGTCATGGCCAACAGGTGTCCGATTCCACCCAACGGATGAGGAACTCGTCATCTCTTATCTTAAGAGGAAGATCTGTCGCCGCCGCCTCCCGATGCATGCCATCAGAGAGATTGACGTTTACAAGTGGGAACCCGACGAATTGCCTGAGCAAGACGTATTGAAGAGCGGTGATAAAGTTTGGTACTTCTTCAGCCCCAGGGATAGGAAGTATCCAAATGGTTCGAGATCGAACCGGGCAACGAGATATGGTTACTGGAAGGCTACCGGAAAGGACCGAGGCATTAGTTATAAATCCCGGTCCGTTGGCGTGAAGAAAACCCTGGTTTTCTACGGCGGCCGTGCTCCAAAGGGCATACGCACCGATTGGGTGATGCACGAGTATACCATGGATGAAGAGGAGCTGAAAAGGTGCCGGAATGTGCAGGATTCCTTTGCTGTTTATAAGCTTTTCAAGAAGGGTGGACCTGGTCCCAGAAATGGTGAACAATATGGAGCACCAGTCAGCGAAGAGGAATCATCTGACGAAGGCGACCCGATAGATGATAACACACCCAACCAACAGAATGTAGAGAGGCATCTGAATGGTGGTGCTTTAGTGAACTTGTCAATTGACAATCAAGATGGGGATCCATTCGACCTTTTTCAGGAGATTTTGAACCAAATTGATGATGAGCCTGAAATAAACCAACCACACAACAATGGTTATGTATTTCCCTCGGTTGGTGCTGAAGAAGAAACCCAATGCACTATGGTGGGGCCATCCCTTACAGAAGCCATTTCTACTGAGCCGAGAGCGATTATGCACCCTTTCGGGGAACAATGCGATGCACAGGCTAGCTTTGACATCACACAGTCAGCAACTTCTCATTTAATACCATATGAGATACAGACTAGCTTTGAAATCACACAATCAGCTACTTCTCATTTCGGACCATATGAGGCAGCTGAGGTCACGTCTGCTCCCAATATTACTGAGAAGGATCCTCACACTCAGGAAGAAGATTTTCTGGAAATAAATGATCTCGATCCGGAAACTAGCTTTTCTAATATGAGGAGTACCAGTAACACCTCAAGCATTGAAGAGATAGGTAGATTGAACAATCATGACATCTACCTTGATGCAGCCATGTTTCTTCAGGACATGGGCAACCAGTTGGATTACCAGCTGCCGAGCCAGTTAAATTATGCAGATCCCATTTCCAGTCAGCTATGGACGCATGATCAGAGATGTAATGTCTTTGCATCAGCGGAATCAAATCAGGTGGTTATGGCTCCACCAACTTCAGGTGTGGTACATGCCGGTAGTTCAATGAATCTTCTTAGTGAGGAAAGACAGAATCAAGGCGGAAACGAGGATGGTGATCCAGAGTCTTGGTATACTTCTGGGATTTGGAGCTACTTGGGATCAATACCCACTCGTCCTGCATTGGCCTCTGAGAATGCCCTAATTAATCGTGCATTTGAGCGGGTGTCAAGTTTTGGTAGAGTTCGAATTGGTGCCAGAGACGCAGCTGTTGCTACAGGTGTGGATCCTGCTGTTGGGAGGAGGAGTGTGGGTAGAAATAGGGATTCCTCTTGTTGTCAATCCTTGTGGCTCTTTGTGCTGTCTTATGGGTGTTGA 1992 0.4709 MDGNHEMVQIDYVDNDVMHIHTTVVFPYKCDTPLSKSGEALQSKLNPPSSERDLRREREGLRCDDYDSGLRESAGRSSFRVYLLGEWRILQRGNLSLTFLCLCVRERTRKMSDSSLVGGFVDPRSWPTGVRFHPTDEELVISYLKRKICRRRLPMHAIREIDVYKWEPDELPEQDVLKSGDKVWYFFSPRDRKYPNGSRSNRATRYGYWKATGKDRGISYKSRSVGVKKTLVFYGGRAPKGIRTDWVMHEYTMDEEELKRCRNVQDSFAVYKLFKKGGPGPRNGEQYGAPVSEEESSDEGDPIDDNTPNQQNVERHLNGGALVNLSIDNQDGDPFDLFQEILNQIDDEPEINQPHNNGYVFPSVGAEEETQCTMVGPSLTEAISTEPRAIMHPFGEQCDAQASFDITQSATSHLIPYEIQTSFEITQSATSHFGPYEAAEVTSAPNITEKDPHTQEEDFLEINDLDPETSFSNMRSTSNTSSIEEIGRLNNHDIYLDAAMFLQDMGNQLDYQLPSQLNYADPISSQLWTHDQRCNVFASAESNQVVMAPPTSGVVHAGSSMNLLSEERQNQGGNEDGDPESWYTSGIWSYLGSIPTRPALASENALINRAFERVSSFGRVRIGARDAAVATGVDPAVGRRSVGRNRDSSCCQSLWLFVLSYGC* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00910 663 MobiDBLite consensus disorder prediction 37 58 - -
Eupl13g00910 663 SUPERFAMILY NAC domain 123 276 IPR036093 GO:0003677|GO:0006355
Eupl13g00910 663 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 126 408 - -
Eupl13g00910 663 MobiDBLite consensus disorder prediction 279 312 - -
Eupl13g00910 663 Pfam No apical meristem (NAM) protein 127 252 IPR003441 GO:0003677|GO:0006355
Eupl13g00910 663 ProSiteProfiles NAC domain profile. 126 276 IPR003441 GO:0003677|GO:0006355
Eupl13g00910 663 FunFam Nac domain-containing protein 86 135 278 - -
Eupl13g00910 663 Gene3D NAC domain 135 278 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00910 Eupl-Chr13 13675625 13681424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00910 111 658 NAC Transcription Factor Family AT1G34190 38.806 4.70e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl13g00910 NAM 3.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00910 - - nnu:104587422 540.036