Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00906 ATGGTTGCTTCAACTCATTGCCGCAGCAATACCGACGTTTACTATGACCATTCTTTCGTCTCCAGAAAGAAGCTCAAGACATTGGACTCGGAACAGCCCAATTCAGTTTCTCTTGTCTGTATAGGCAATATTTTCGACGCTGCCTCGCCTCTTCCAGCACACACAGACGGCTGTTCATCCTTTGGGTGCTCAGATGATCTTCATTGTGCTTCCTCCAGCTGCAATACTAATGAAAGAGTAGGCTTACATGTCGCAATGGAGGGAAGCATCCAGTCAATGGACAATGGTGGTGGTATTCCACAATTGTGCAGTATCGGTGAGACCCAATATCAAGACAAGAGCTTTACTGGATATGCTCCAGCTGCTTCTGTGAGTGGGTGGATGTATGTTAATGAAAGTGGAAAGATGTGTGGTCCATATATTCAAGAGCAGCTATATGAGGGCTTGTCTACTGGATTTTTGCCAGAGGATCTTCTGGTATATCCTGTTTCAAACGGAGTTCTAATCAATCCTGTGCCATTGAAGTATTTCAGGCTTTTTCCAGAGCATGTTGCGACAGGTTTTGCATATTGGACTGCACCCATGCCGAATACATCATCAAGCGAGCCTACGAACTGTTCTACTTCTTGCAACAGAGATTTGCCATCCCATGGACAAGGGGAGTCTGTTGGTTATGCTGCTCCCTCTATTGTTTATTCTGAATCACAGTCGGCACCCCAGTCATGTGTGAATTATAGTAGTTATGGATCTGAACTGCAAAAGTCAAATACAGATACAGAAGCAACTAGCTGGAGTTCATTGGACCCGCTCATGTCAAGTGAAGAATCATGTTGGGTGTTTGAGGATGGTGAGGGGAGAAAACATGGGCCACATACTCTTGCAGAAATCTATTCTTGGTATCACTACGGATATCTTCAAGATTCGTTGATGATATATCATGTGGATAACAAATTTCAACCCTTTATTCTTGCATCTATGTTAAATGCATGGAGAACAAATAGACCCAAGATTGTTTCTCAAACTGGGATTTCAAACAACAAGACCAGCATTCTGATCAGCTTCATATCCAAAATATCAGAAGAAGTTTCTGATCAACTGCACTCAGGAATCATGAAAGCAGCTCGCCGTGTGGTGCTAGACGAGATAATTAGTAGCATCCTACCTGAGTTTGTGGCCACGAAGAAAGCTCAGAGACATCTCCAACTTGAGACTGCAAAACAAGCTGTCAATACTTGTTCTTTGGCAGACAAAAGGAATGAGGTTGTTGAGAAGAGGAAGAAAAGTGCTGTTTCCGGGGATGTGGTCGCCATCTCGCTTCCTTTACATGATCAAATACTCCCTGTTCTTGAAAATAAAATAGAGTCTCCAGCATGTACAAAATCTTTTGGGAGAATTGAAAGTTTTTTGGGAGCATTACCCATAGCCCAGAGACTGTTTTTTGATTCTTGCATGCAAGTCATGTGGAATGCTGTCTTTTACGATCCTATATCAGACTATTCCTCTGCCTGGCGAAAGAGAAAACGTTGGTCTGGGTATCCTATTCTAGCAAATACTGTAGCTGCTTTTGAACAGGATATGCCATTTAAGGATTCTCGAGACATGATTGGGAAGCTAACTGCTGAATCTGAACAATCTGAGCAGGAATCCTCCATTTTTGAGGTTGATTGCCCTCCTGGTTTTGGACCTGCAATGAAGAGCTCAGATATTCTTGCCCAATCGTCTTCCATTTCAGAACCTGAGTCTTCACATGTGCGAGAAGACTCACTAAGACAGAATTGCTCTGTTTACACTAGTCAAATCCATGATAACATAAAAGATATCCAAGAGAGTGTAGAAAAAGTGCTACATTTATCAGCACAGGAGTCTTTGTCTGAATACTTTGAGAATTTGTTGGAGGAGGAATGTATGAAGTTTATTGATCCAATGGGGGATGAATCAAAAGAGGATGCTATTGGTATTGGTGACCAATTTTGCAAGTCTTCCTTTGCATGTCCTCATACAAGTGGATACGATTCTCTTGATGTGTCTGCTGATTTGAGGATGAAGGTTTCTGGTATTTCTGCAGAAACTCTTTCATCCGATAATGTCCAAACTGCAGCACAACCAGTGAGATCCTTCTTTAACTCTACCATTTCCCAATCAGAAGGTTTTCAATCAACTCATTTTGTTAGTGCATTTGAAAAGTTGGGATTACCCATTGTTGATGTGGTCGATGGCCAAGAGTTTGATGAACCACCATGCCCTGGGCTTGAACACAGTTCCATACCTACTGTTCCATATCAGAAAATCAAATCTCGACCATCAAAGTTGGATGAGTGTGTTCCTAAGATTGCTGAATATGTTGCCCTGGCAATTTGTCGGCAAAGGTTACACAATGACGTGCTTAAAGAGTGGCGGTCCTCACTTTTTGATGGTGCGCTTCATCATTGTTTTCTGACATGGTGTGCTAAACACAACGGATCAGATACCACTGAGGAAGGGACATTAAATTCTGGTAAAGGAAAACCCACCGATTCTCCTGCTGTACTAGAAAAACATAGAGAAAGATCAAGGAATTGTAGCAGTTCAGGCTCAGTCGGTGTATCCCTAATGATTGGTAAATATACATATTTCCGCAAGAGAAAGTTAGGACGGAAAAAGTTAGGATCTTTGTCGCAGTATGTGGTTTCAAAGGATACCGAGTTACTGAGTCAGAATAAGCCAGGAAATCAGGAAATTTCTGGAGTAGTGTCCGAGACAACGGAATTGGAAACTGTAGATGTGAACCCTTCAAAGGGCAAGACCAATGAATACAAGGCAGCATCGCCTGTGAACGGTGTGTGTTCACAGGCCATAGTTCAAAACAGATTGGCTGATGATTGCACATCGATCAGGAAGAGAAAAACTCATAAATCAAGGAAGAATGCTTGTATTATTCAATGTAGTAATGAGGTTATGAAAGATGACAGAAAATGTAACATTGAAGGGTATTCAGCTTCTCCACCAGATTCTATTGACATTGAGAAGGTTGTGGATAGCCATGGCTGTGATCTTAAACATCAGAAAGAGCTTGCTGGGCATGGCTCCAACAAGATACCAAATTCCTGCAAAAGTTTTAAAATTTCCAATGGAAATGCCGCTAAGAAGGCAAAGAGTAGACAAGTAGCAGTTCAGAAGGTTAGGTCCAGTAAATTCAGAATACCGGATTCATGTCCCAAGTCTGTTGGGTGTGCTCGGTCTTCTATCAATGGCTGGGAATGGCGTAAATGGTCACTAAATGCAAGTCCTGCTGACAGATCTAGTGTTAGAGGAACTCGTTTAGCTCAAATTCGATATATAGGTTCTGAAGTTTATACATCTCAGTGTGCAAATGGGAAGGGCCTCTCTGCAAGAACAAACAGGGTTAAGTTTCGTAATCTGTTAGCTGCTGCGGAGGGTGCTGAGCTTCTAAAAGTCGCCCAGTTGAAGGCAAGGAAAAAGCGTCTGCGTTTCCAACGGAGCAAGATACATGACTGGGGTCTTGTTGCTCTTGAGCCAATTGAGGCAGAGGATTTTGTAATTGAATACGTAGGCGAATTGATACGTCCTCGGATATCAGATATACGAGAGCGTCAGTATGAAAAGATGGGAATCGGCAGCAGTTATCTTTTTAGACTGGATGATGGTTATGTGGTTGATGCTACAAAGCGTGGTGGAATTGCAAGATTTATAAACCATTCATGTGAGCCTAACTGCTATACCAAAGTCATCACTGTCGAGGGTCAGAAAAAGATATTCGTTTATGCTAAACGGCAGATATCTGCTGGTGAAGAAATCACTTATAATTACAAGTTTCCGCTGGAGGAGAAAAAGATTCCCTGCAACTGCGGTTCTAAGAGGTGTCGTGGATCAATGAACTAG 3879 0.4225 MVASTHCRSNTDVYYDHSFVSRKKLKTLDSEQPNSVSLVCIGNIFDAASPLPAHTDGCSSFGCSDDLHCASSSCNTNERVGLHVAMEGSIQSMDNGGGIPQLCSIGETQYQDKSFTGYAPAASVSGWMYVNESGKMCGPYIQEQLYEGLSTGFLPEDLLVYPVSNGVLINPVPLKYFRLFPEHVATGFAYWTAPMPNTSSSEPTNCSTSCNRDLPSHGQGESVGYAAPSIVYSESQSAPQSCVNYSSYGSELQKSNTDTEATSWSSLDPLMSSEESCWVFEDGEGRKHGPHTLAEIYSWYHYGYLQDSLMIYHVDNKFQPFILASMLNAWRTNRPKIVSQTGISNNKTSILISFISKISEEVSDQLHSGIMKAARRVVLDEIISSILPEFVATKKAQRHLQLETAKQAVNTCSLADKRNEVVEKRKKSAVSGDVVAISLPLHDQILPVLENKIESPACTKSFGRIESFLGALPIAQRLFFDSCMQVMWNAVFYDPISDYSSAWRKRKRWSGYPILANTVAAFEQDMPFKDSRDMIGKLTAESEQSEQESSIFEVDCPPGFGPAMKSSDILAQSSSISEPESSHVREDSLRQNCSVYTSQIHDNIKDIQESVEKVLHLSAQESLSEYFENLLEEECMKFIDPMGDESKEDAIGIGDQFCKSSFACPHTSGYDSLDVSADLRMKVSGISAETLSSDNVQTAAQPVRSFFNSTISQSEGFQSTHFVSAFEKLGLPIVDVVDGQEFDEPPCPGLEHSSIPTVPYQKIKSRPSKLDECVPKIAEYVALAICRQRLHNDVLKEWRSSLFDGALHHCFLTWCAKHNGSDTTEEGTLNSGKGKPTDSPAVLEKHRERSRNCSSSGSVGVSLMIGKYTYFRKRKLGRKKLGSLSQYVVSKDTELLSQNKPGNQEISGVVSETTELETVDVNPSKGKTNEYKAASPVNGVCSQAIVQNRLADDCTSIRKRKTHKSRKNACIIQCSNEVMKDDRKCNIEGYSASPPDSIDIEKVVDSHGCDLKHQKELAGHGSNKIPNSCKSFKISNGNAAKKAKSRQVAVQKVRSSKFRIPDSCPKSVGCARSSINGWEWRKWSLNASPADRSSVRGTRLAQIRYIGSEVYTSQCANGKGLSARTNRVKFRNLLAAAEGAELLKVAQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVITVEGQKKIFVYAKRQISAGEEITYNYKFPLEEKKIPCNCGSKRCRGSMN* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00906 1292 MobiDBLite consensus disorder prediction 823 855 - -
Eupl13g00906 1292 ProSiteProfiles SET domain profile. 1153 1270 IPR001214 GO:0005515
Eupl13g00906 1292 Pfam GYF domain 278 320 IPR003169 GO:0005515
Eupl13g00906 1292 SMART PostSET_3 1276 1292 IPR003616 -
Eupl13g00906 1292 Gene3D SET domain 1112 1292 IPR046341 -
Eupl13g00906 1292 CDD SET_SETD1 1141 1288 IPR037841 GO:0042800|GO:0048188
Eupl13g00906 1292 Pfam SET domain 1165 1269 IPR001214 GO:0005515
Eupl13g00906 1292 SMART set_7 1153 1276 IPR001214 GO:0005515
Eupl13g00906 1292 ProSiteProfiles GYF domain profile. 275 328 IPR003169 GO:0005515
Eupl13g00906 1292 ProSiteProfiles Post-SET domain profile. 1276 1292 IPR003616 -
Eupl13g00906 1292 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1049 1292 IPR044570 GO:0042800|GO:0051568
Eupl13g00906 1292 SUPERFAMILY GYF domain 264 325 IPR035445 -
Eupl13g00906 1292 Gene3D - 264 350 IPR035445 -
Eupl13g00906 1292 Gene3D - 116 185 IPR035445 -
Eupl13g00906 1292 SUPERFAMILY SET domain 1149 1289 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00906 Eupl-Chr13 13549333 13558356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00906 1152 1291 C2H2 Transcription Factor Family AT2G23740 35.802 1.85e-18 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl13g00906 SET 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00906 - - tss:122657393 1270.37