Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g00888 ATGGCGTCCTCAAAGGCAGGTCTTCTGGATTCATCTGGAGCAAACTCTTATGCATCTTCATCATCTGCCATGGATCTATCCAATAATAGAGATCAACGGCAATCGATTGAAATATTTGAACCATCGAATTATGTCAGACAACCCAGTGAGAGTAAAGAGATAGAAAGCGAGACTGCATCTCAGCCGCACGAGGAAGAATCAAGAACATCCTCTGTTAGGGAACCTGTCGATACGTGGATGGCATTTGCAAGAGAGTCTGAGAAGTATAAGACCACAGGTGACTCTGAACCAGGTTTGAGTGGGATTACACAGAGACAGAATGATTTCTTGGTGGAGTCCAGTGAAGCTCGTGGACACCCATCAAATGGCCAATTTAATCAGACTGTAAGTGTAGCTAGCATGGCTGAAAGGGCTAGTGAATGGGGACTGATAATTGAGTCAGAAATTGGAGCAGATAATGCCCAAGCCGTGCGCCTAAGGCCATCATCAGGAGAGAGAAGTAAAAATTCAACAGATAGATCTATGGATTATAGACGCACATCCAAAGAATCAAATTCTGGATTTGAATTCAGCGTCCCTAGGGTCTCTCAAGAGCTGAAGGATGCACTGGCCACACTCCAACAGACATTTGTTGTGTCAGATGCGACCAGTCCGGAGTGCCCTATAATGTACGCCAGTGCTGGGTTTTTCAGTATGACTGGTTATTCTTCAAAGGAGGTTATTGGAAGGAACTGTCGCTTTCTTCAGGGACCTGATACAGATCAGAATGAAATTGAAAAAATACGAGTGGCCGTCAAAACTGGGAAAAGCTACTGTGGCAGGCTCTTGAATTACAAGAAGGATGGCACACCTTTCTGGAATCTTCTAACCATCACACCCATAAAAGATGAAACTGGGAGGGTTATCAAATTTATAGGAATGCAAGTTGAGGTCAGCAAATATACAGAAGGTCTGAATGACAAGGCTTTGCGACCAAACGGCTTGCCAAAGTCCCTAATTCGCTACGATGCTCGTCAGAAGGAGAATGCCTTATGTTCAATCACTGAGGTTGTCCAGACTGTGAAGCATCCACGAGTTCATATTCAAGCCACAGATCCCAGCACCCCTGGCAAGCTTGAGGAGCATGAGAAGTTTAACCTTGATTACTTTCTGCCAAAATCTGTAGAACTTGAGAACCTAAGTGCACATGGTAGACAAACTCCTCTAATGGATGCCAGAAGTATATCCAGAACAAGTTCTACTGGTGATGCTAGCAAGAAGTTTAGAAAGTCAGGACGCATTTCATTGATGGGGTTTAAAGGGAGGTCTCAAAGCTCTGCAGAAAGGAATGATCCTCAGCCTAATATTGAGCCAGAGGTTCTGATGACTAGAGATGTACAACGCTCTGACAGCTGGGATTGCTTGGAAAGAGAAAGGGATATACGCCAAGGATTTGACTTAGCGACGACATTGGAACGCATTGAAAAGAATTTTGTCATTACAGATCCTAGACTTCCTGATAACCCCATTATTTTTGCATCTGATAGCTTTCTTGAACTGACAGAGTATACTCGGGAAGAAATTTTGGGAAGAAACTGCAGATTTCTTCAAGGCCCTGATACGGATCAAGGAACCGTCTCAAAAATAAGAGATGCTATCAGAGAACATAGAGAAATCACCGTCCAGTTGATTAACTATACAAAGAGCGGGAAGAAGTTTTGGAATTTATTCCACTTGCAACCTATGCGTGACCAAAAGGGCGAACTTCAATACTTCATTGGTGTGCAATTAGATGGAAGTGATCATGTAGAACCCCTTCGAAACCGCCTCTCGGAGAAAACTGAGCAGCAAAGTTCTAAGTTGGTCAAAGCTACTGCAGAAAATGTTAATGAAGCTGTTCGAGAGCTTCCAGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATCCATTCTCGACATGTGTTTCCAAGGCCTCACAAAAAGAATAATTCTTCTTGGATAGCGATTCAAAAGATCATTGCGCGTGGTGAGCGAATTGGTCTGAAGCATTTCAAGCCCATAAAACCTTTGGGTTGTGGTGATACTGGCAGTGTTCATTTGGTGGAATTGCAAGGTACAGGTGAATTGTACGCTATGAAGGCGATGGACAAAACTGTAATGTTGAATCGTAACAAGGTTCATCGGGCATGCATTGAGAGGGAAATCATTTCGCTGTTGGATCATCCTTTTCTTCCTACGTTATACACTTCTTTTCAGACCGCTACACACGTTTGTTTGATAACAGACTTTTGCCCTGGTGGGGAGCTGTTTGCGTTGCTAGACAAGCAGCCTATGAAGATTTTTAAAGAGGAATCTGCGAGGTTCTACGCCGCAGAAGTCATAGTTGGCTTGGAATATCTTCATTGTTTAGGAATAATCTATCGAGACCTGAAACCTGAAAATGTGTTACTCCAAAAGGATGGGCATGTCGTATTAACTGACTTTGATCTATCATTTTTGACAGCCTGCAAACCCCAAGTTTTAAAGCATCCATTGCCGAGAAGAAGATCTAGAAATCAACCACCTCCAACATTTGTTGCAGAACCCATTACACAATCAAATTCATTTGTTGGAACCGAAGAGTACATTGCTCCTGAAATTATTACGGGTGCAGGCCACAGTAGTGCTATTGATTGGTGGGCTCTTGGTATTTTGCTGTATGAGATGCTTTATGGCCGTACACCTTTTAGGGGAAAGAACAGGCAGAAAACATTTGGGAACATTCTGCACAAAGACCTCACCTTTCCAAGTAGCATCCCGGTGAGCCTTGCAGCTAGGCAATTGATCCATGGATTATTGAATAGAGACCCTGCAAACCGTTTAGGATCAAACACTGGTGCCAATGAAATCAAACAACACCCCTTCTTCCGTGGAATCAATTGGCCCCTCATCCGTTGCATGAGCCCACCACCATTAGACGTGCCTCTTCAAATAATTGGGAAAAAAACAAGTTCAAAGGCTACGGATGGACAGTGGGGAGATGAGGGAATGCTTGTTCAGTCATTGGACATTTTTTAA 3036 0.4345 MASSKAGLLDSSGANSYASSSSAMDLSNNRDQRQSIEIFEPSNYVRQPSESKEIESETASQPHEEESRTSSVREPVDTWMAFARESEKYKTTGDSEPGLSGITQRQNDFLVESSEARGHPSNGQFNQTVSVASMAERASEWGLIIESEIGADNAQAVRLRPSSGERSKNSTDRSMDYRRTSKESNSGFEFSVPRVSQELKDALATLQQTFVVSDATSPECPIMYASAGFFSMTGYSSKEVIGRNCRFLQGPDTDQNEIEKIRVAVKTGKSYCGRLLNYKKDGTPFWNLLTITPIKDETGRVIKFIGMQVEVSKYTEGLNDKALRPNGLPKSLIRYDARQKENALCSITEVVQTVKHPRVHIQATDPSTPGKLEEHEKFNLDYFLPKSVELENLSAHGRQTPLMDARSISRTSSTGDASKKFRKSGRISLMGFKGRSQSSAERNDPQPNIEPEVLMTRDVQRSDSWDCLERERDIRQGFDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPDTDQGTVSKIRDAIREHREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEQQSSKLVKATAENVNEAVRELPDANLRPEDLWAIHSRHVFPRPHKKNNSSWIAIQKIIARGERIGLKHFKPIKPLGCGDTGSVHLVELQGTGELYAMKAMDKTVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTATHVCLITDFCPGGELFALLDKQPMKIFKEESARFYAAEVIVGLEYLHCLGIIYRDLKPENVLLQKDGHVVLTDFDLSFLTACKPQVLKHPLPRRRSRNQPPPTFVAEPITQSNSFVGTEEYIAPEIITGAGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFGNILHKDLTFPSSIPVSLAARQLIHGLLNRDPANRLGSNTGANEIKQHPFFRGINWPLIRCMSPPPLDVPLQIIGKKTSSKATDGQWGDEGMLVQSLDIF* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g00888 1011 PANTHER FLIPPASE KINASE 1-RELATED 163 979 - -
Eupl13g00888 1011 FunFam Putative LOV domain-containing protein 761 974 - -
Eupl13g00888 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 216 312 IPR035965 -
Eupl13g00888 1011 Gene3D Transferase(Phosphotransferase) domain 1 761 971 - -
Eupl13g00888 1011 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Eupl13g00888 1011 SMART pas_2 478 547 IPR000014 -
Eupl13g00888 1011 SMART pas_2 197 266 IPR000014 -
Eupl13g00888 1011 Gene3D Phosphorylase Kinase; domain 1 676 760 - -
Eupl13g00888 1011 Pfam PAS domain 216 312 IPR000014 -
Eupl13g00888 1011 Pfam PAS domain 499 591 IPR000014 -
Eupl13g00888 1011 SUPERFAMILY Protein kinase-like (PK-like) 653 985 IPR011009 -
Eupl13g00888 1011 Pfam Protein kinase domain 679 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00888 1011 FunFam LOV domain-containing protein 676 760 - -
Eupl13g00888 1011 FunFam Putative LOV domain-containing protein 209 365 - -
Eupl13g00888 1011 CDD PAS 491 591 IPR000014 -
Eupl13g00888 1011 ProSiteProfiles Protein kinase domain profile. 677 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00888 1011 Gene3D PAS domain 209 365 - -
Eupl13g00888 1011 ProSiteProfiles PAS repeat profile. 195 268 IPR000014 -
Eupl13g00888 1011 SMART pac_2 272 314 IPR001610 -
Eupl13g00888 1011 SMART pac_2 553 595 IPR001610 -
Eupl13g00888 1011 CDD STKc_phototropin_like 675 985 - -
Eupl13g00888 1011 FunFam LOV domain-containing protein 465 629 - -
Eupl13g00888 1011 MobiDBLite consensus disorder prediction 1 49 - -
Eupl13g00888 1011 MobiDBLite consensus disorder prediction 50 72 - -
Eupl13g00888 1011 ProSiteProfiles PAS repeat profile. 480 549 IPR000014 -
Eupl13g00888 1011 MobiDBLite consensus disorder prediction 155 183 - -
Eupl13g00888 1011 MobiDBLite consensus disorder prediction 1 77 - -
Eupl13g00888 1011 Gene3D PAS domain 465 629 - -
Eupl13g00888 1011 CDD PAS 222 311 IPR000014 -
Eupl13g00888 1011 ProSiteProfiles PAC domain profile. 550 604 IPR000700 -
Eupl13g00888 1011 ProSiteProfiles PAC domain profile. 269 323 IPR000700 -
Eupl13g00888 1011 MobiDBLite consensus disorder prediction 165 183 - -
Eupl13g00888 1011 SMART serkin_6 677 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g00888 1011 NCBIfam PAS domain S-box protein 501 594 IPR000014 -
Eupl13g00888 1011 NCBIfam PAS domain S-box protein 221 312 IPR000014 -
Eupl13g00888 1011 SUPERFAMILY PYP-like sensor domain (PAS domain) 492 591 IPR035965 -
Eupl13g00888 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g00888 Eupl-Chr13 13230847 13285875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g00888 132 1010 AGC Kinase Gene Family AT5G58140 72.172 0.0 1279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl13g00888 Pkinase 1.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g00888 K20715 - nnu:104606902 1543.48